PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR95847.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 390aa    MW: 42882.6 Da    PI: 4.5001
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR95847.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.93e-19103152255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++a +++++g
  RWR95847.1 103 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDAEARRIRG 152
                 69*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MCGGAIISDF IPATRSRRIT AGDLWTDLKK NAKASKKSQA VNVDDDFEAD FLDFKDDSDE  60
EEGEVIDVKP FASLPNPVSF SRAKPVEFNG PAERSAKRKR KNQYRGIRQR PWGKWAAEIR  120
DPRKGVRVWL GTFNTAEEAA RAYDAEARRI RGKKAKVNFP EDSPPDTRKR SMAPTSNKVP  180
KQNLSEKSSL NQTFNFVNNP GNEFYDEFGF MEEKASIEPS GCMGSFPTIG NPIKLDAFTP  240
PADCGGVGFH SDEGSNSLEC SDFGWENESK TPEISSVFAT TYEEDESGFL EEVPAKKLKI  300
NAGDSVPVEN NIALKLCEEL SAYESCMKFL QIPYMDGSSD QSLESLLSGD AGQDGANSIN  360
LWSFDDLPVA GGDLNMVNGV EKADASAAIW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14230.36e-58ERF family protein