PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR95827.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family C3H
Protein Properties Length: 470aa    MW: 54415.4 Da    PI: 8.5122
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR95827.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.81.9e-08448469325
                 S---SGGGGTS--TTTTT-SS-S CS
     zf-CCCH   3 telCrffartGtCkyGdrCkFaH 25 
                 + lCr++ + G C+yGd+CkF H
  RWR95827.1 448 RQLCRYYPQ-GRCRYGDSCKFLH 469
                 78*******.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    
MAISDHEMIE EEDYQEDDES GTELNVSDDS EEDPTYDFLE KTRLSLSKLS MKKSKSRIPK  60
ELDPESEEES DFVEVKVPKL DKSDEKCYDQ VEKIIQAGQL EKLRVEQCKV YLRKYGLRIT  120
GKKDVLMERI REHLEIIDGG GEKKYATSSF VLNCKGDACT GDVVMFEQNV YEMFSIASRS  180
ATGPPCGTRI VVGRIVKESY GAAKQQHTFT IEVLWSRGEK PLPPLYPLLI KGRNLYRLKT  240
MRQPWADEDE RKKVLLEKHS RGHFARSCRE TRIQEKEMRK MGTSLRTKRT ASSIIKGQSV  300
QHQQNSVQRT ELRQQNIIQQ PQQHPFECRN SAATTEHHGS LPNISNGILP YPIGHQNSVI  360
TAEQQSRFHS DGRLRNPTQF FETQLSNIQE HLHTNISAYF QQSPLARRIL VTDTDDGQLY  420
FHAKNYYSTD TRRRPLSSLN TSPPRMRRQL CRYYPQGRCR YGDSCKFLHQ