PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR95322.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 264aa MW: 29368.7 Da PI: 4.6299 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 71.4 | 2.3e-22 | 5 | 129 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGf+F+P+ + l+++yL kkv g +l+ +++ e ++y + +Lp++ + +++e+y F+k++k +++g++++r+tk+gyWk tg++ke++++ +++ RWR95322.1 5 LPPGFQFNPSPSVLLKDYLLKKVLGVQLPS-DAVIEGEVYGGD-AQLPEADDIGDRELYKFVKNKK-NEKGTKTKRMTKNGYWKVTGNKKEIKDEsGKH 100 79***************************9.556666888877.78997667799*******9866.568***********************997778 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 ++g+ ++Lv+ +++++g+k + +m+ey+l RWR95322.1 101 TIGTMRSLVLV-ETNNSGRKRTLLMDEYSL 129 8*********9.6788899999******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence |
MTPNLPPGFQ FNPSPSVLLK DYLLKKVLGV QLPSDAVIEG EVYGGDAQLP EADDIGDREL 60 YKFVKNKKNE KGTKTKRMTK NGYWKVTGNK KEIKDESGKH TIGTMRSLVL VETNNSGRKR 120 TLLMDEYSLD GSLKNIINSE GWVVCKIKQS KRSPERPNSQ EEEEGGGGGG GGGYDGLTSR 180 PTASPAPQGI DNRSSNLVID ERHCVDMDVI WASMQDNQAM DQSFDQSSTM MEPPALDDNW 240 KNDYDWANFV NECLDYTYDP ESQA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15170.1 | 1e-12 | NAC family protein |