PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR95208.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

CAMTA

Protein Properties

Length: 964aa MW: 109155 Da PI: 6.7469

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR95208.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	155.9	8.3e-49	33	145	5	117
CG-1 5 kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLe 103 +rwl+++ei+aiL n +++ ++ + p+sg++iLy+rk++r+frkDG++wkkkkdgktv+E+he+LKvg + +++yYah+++np+f rr+ywlLe RWR95208.1 33 LTRWLRPNEIYAILCNCVYFKVNVKPVELPQSGTIILYDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGYQDRIHVYYAHGQDNPNFVRRIYWLLE 131 68*********************************************************************************************** PP CG-1 104 eelekivlvhylev 117 ++le+ivlvhy+ev RWR95208.1 132 KKLEHIVLVHYREV 145 **********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 964 aa Download sequence
MMESVIQRLA GWDIHGFHTL EDLDIVKTKE EALTRWLRPN EIYAILCNCV YFKVNVKPVE 60 LPQSGTIILY DRKMLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGYQDRIH VYYAHGQDNP 120 NFVRRIYWLL EKKLEHIVLV HYREVSEDNA TSCLVPPNEC KEALSLSNRM HHGAPLTPVN 180 SHSGSIHSET SGSRVVSEEI NSGIDHAFHA GTSLVGESTE FGSQLDESLI VTDHEQRLRE 240 INTLDWADLF EANRNPNSAE PGNGEISFFD LQRPYGLSDS RSHDHFLPCH NSSSLGNPSI 300 DINGSGYLSA IQPNNGYFQP VGDQNVQPSV FETIDTNLLK KDAGMATVGA VETSEMFDKN 360 PLLSQDSFTR WMSIIENDSP GSVDELPMEC SISTVNGSVA TMVKDESSLQ EAFSITEVSP 420 AWAFSTEETK VIVIGYFHEA HAYLAESNLF CVFGDVSVPA ERVQVGVFRC MALPCRAGLV 480 DFYLSLDGHR PISQVLSFEY RPVSTNQMSN EISLLEDEKS KWRDLQLQIR LAHLIFSTTN 540 NVATLSSDIP PDVLKEAKKF RVLAPSYEKD WTKFVDLIMN KEMSFAEAHQ NFFELTLKSK 600 LQEWLLERVA EGCKTTPRDC KGQGVIHLCA MLGYTWAVYL FKLSGLSLDF RDSSGWTALH 660 WAAYYGREQM VAFLLSAGAN PSLVSHPTAK YPGGNTAADL ASMKGYDGLA AYLAEKGLTA 720 HFNAMCTAGN VSGSLRTTAT TMEQPENLNE EEQLLRDSLA AYRSAADAAA RIQTALREHA 780 LKVRTKVVQL ENTETEALNI ISAMKIQHAY RNYHSRKRLA AAVRIQHRFR TWKIRKDFLN 840 MRHQAIRIQA AFRGHLVRRQ YHKILWSVGV LEKAILRWRK KRKGLRGLPA EPAIASGAEE 900 VQEDDVEEDF YQLSRKQAEE RVERSVVRVQ AMFRSHQAQK EYRRMKIAFD QAKFEYEGLF 960 IESE

Sequence ? help Back to Top

Protein Sequence Length: 964 aa Download sequence

MMESVIQRLA GWDIHGFHTL EDLDIVKTKE EALTRWLRPN EIYAILCNCV YFKVNVKPVE  60
LPQSGTIILY DRKMLRNFRK DGHNWKKKKD GKTVKEAHEH LKVGYQDRIH VYYAHGQDNP  120
NFVRRIYWLL EKKLEHIVLV HYREVSEDNA TSCLVPPNEC KEALSLSNRM HHGAPLTPVN  180
SHSGSIHSET SGSRVVSEEI NSGIDHAFHA GTSLVGESTE FGSQLDESLI VTDHEQRLRE  240
INTLDWADLF EANRNPNSAE PGNGEISFFD LQRPYGLSDS RSHDHFLPCH NSSSLGNPSI  300
DINGSGYLSA IQPNNGYFQP VGDQNVQPSV FETIDTNLLK KDAGMATVGA VETSEMFDKN  360
PLLSQDSFTR WMSIIENDSP GSVDELPMEC SISTVNGSVA TMVKDESSLQ EAFSITEVSP  420
AWAFSTEETK VIVIGYFHEA HAYLAESNLF CVFGDVSVPA ERVQVGVFRC MALPCRAGLV  480
DFYLSLDGHR PISQVLSFEY RPVSTNQMSN EISLLEDEKS KWRDLQLQIR LAHLIFSTTN  540
NVATLSSDIP PDVLKEAKKF RVLAPSYEKD WTKFVDLIMN KEMSFAEAHQ NFFELTLKSK  600
LQEWLLERVA EGCKTTPRDC KGQGVIHLCA MLGYTWAVYL FKLSGLSLDF RDSSGWTALH  660
WAAYYGREQM VAFLLSAGAN PSLVSHPTAK YPGGNTAADL ASMKGYDGLA AYLAEKGLTA  720
HFNAMCTAGN VSGSLRTTAT TMEQPENLNE EEQLLRDSLA AYRSAADAAA RIQTALREHA  780
LKVRTKVVQL ENTETEALNI ISAMKIQHAY RNYHSRKRLA AAVRIQHRFR TWKIRKDFLN  840
MRHQAIRIQA AFRGHLVRRQ YHKILWSVGV LEKAILRWRK KRKGLRGLPA EPAIASGAEE  900
VQEDDVEEDF YQLSRKQAEE RVERSVVRVQ AMFRSHQAQK EYRRMKIAFD QAKFEYEGLF  960
IESE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein