PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR95148.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 501aa MW: 54801.9 Da PI: 8.2436

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR95148.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.6	8e-31	263	321	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+ RWR95148.1 263 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAiGCPVRKQVQRCAEDKTILITTYEGNHNHP 321 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MDRPQEMALL HPTHSLRHNS GNLDRRNSIQ EMDFFSENRR PIASPAPNLQ KKDPLERIDP 60 HHVNTGLHLV SGNSGTGLSL IEEKEKPKDK MIPLQVEIDR LSEENQKLRS MLDQITMNYG 120 VLQNQLISAI QQQEQEASKH RLGQMDEKND MMSRELSAKQ FMDPGPSGGA HEASHDETQD 180 LSTSMNNNST IGVGQKESAH NMVSIARKRP FVADESDQSP HSWEANKNPK LAQPRTTDEA 240 TTEYPCRKAR VSVRARSDAP MITDGCQWRK YGQKMAKGNP CPRAYYRCTM AIGCPVRKQV 300 QRCAEDKTIL ITTYEGNHNH PLPPAATAMA NTTSAAAKML LSGSTTSKET HMSPSFFPSL 360 PYTSTMATLS ASAPFPTITL DLTHNPNPNP MQFHHSPPPS TPFPFPLSGC APLLGQPIFL 420 PPKQPIVPMV QLGQRHPSLT EVFTAAIAAD PNLSAALAAA ITTIMGKPPN SSSGSGSSPS 480 RLTVAPTSPQ LPQSCTTFST N

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MDRPQEMALL HPTHSLRHNS GNLDRRNSIQ EMDFFSENRR PIASPAPNLQ KKDPLERIDP  60
HHVNTGLHLV SGNSGTGLSL IEEKEKPKDK MIPLQVEIDR LSEENQKLRS MLDQITMNYG  120
VLQNQLISAI QQQEQEASKH RLGQMDEKND MMSRELSAKQ FMDPGPSGGA HEASHDETQD  180
LSTSMNNNST IGVGQKESAH NMVSIARKRP FVADESDQSP HSWEANKNPK LAQPRTTDEA  240
TTEYPCRKAR VSVRARSDAP MITDGCQWRK YGQKMAKGNP CPRAYYRCTM AIGCPVRKQV  300
QRCAEDKTIL ITTYEGNHNH PLPPAATAMA NTTSAAAKML LSGSTTSKET HMSPSFFPSL  360
PYTSTMATLS ASAPFPTITL DLTHNPNPNP MQFHHSPPPS TPFPFPLSGC APLLGQPIFL  420
PPKQPIVPMV QLGQRHPSLT EVFTAAIAAD PNLSAALAAA ITTIMGKPPN SSSGSGSSPS  480
RLTVAPTSPQ LPQSCTTFST N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	2e-91	WRKY family protein