PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR95065.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 357aa MW: 38967.9 Da PI: 6.6685

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR95065.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.6	2.8e-33	37	91	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LHerFv+av+qLGG++kAtPkti+++m+vkgLtl h+kSHLQkYRl RWR95065.1 37 KPRLRWTADLHERFVDAVTQLGGPNKATPKTIMRAMGVKGLTLFHLKSHLQKYRL 91 79****************************************************8 PP
2	Myb_DNA-binding	69	7.8e-22	39	90	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++e++vdav+qlGg+ t+ktI+r mg kg+tl ++ks++qky+ RWR95065.1 39 RLRWTADLHERFVDAVTQLGGPnkaTPKTIMRAMGvKGLTLFHLKSHLQKYR 90 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MFSGLIQRPE AVISSDEEIH TPSLRVDPCL VLTADPKPRL RWTADLHERF VDAVTQLGGP 60 NKATPKTIMR AMGVKGLTLF HLKSHLQKYR LGKQSGKEPT EQPKDASYLS DGQGKNTSPQ 120 GVLNSDINEG YEVKEALRAQ MEVQRKLHEQ LEVKKHLEIC IDAQARYLET LLERACKLTA 180 DLSTASTTLD TTGQGLSELA IKAASSPHCP SSLSSFQQLP TEGVRACSPK DETPNRPPHG 240 TDCSTESCLT SNESPAQLCC EAFPTGGKRR TRNLEGGSDS MIWGETETGR GVIDAGYVNP 300 HAQFSFLSVF GLKERDSKEA QMNEVTLQHL PRDVKPDTIT GNVFGSATSP YGGFKGM

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MFSGLIQRPE AVISSDEEIH TPSLRVDPCL VLTADPKPRL RWTADLHERF VDAVTQLGGP  60
NKATPKTIMR AMGVKGLTLF HLKSHLQKYR LGKQSGKEPT EQPKDASYLS DGQGKNTSPQ  120
GVLNSDINEG YEVKEALRAQ MEVQRKLHEQ LEVKKHLEIC IDAQARYLET LLERACKLTA  180
DLSTASTTLD TTGQGLSELA IKAASSPHCP SSLSSFQQLP TEGVRACSPK DETPNRPPHG  240
TDCSTESCLT SNESPAQLCC EAFPTGGKRR TRNLEGGSDS MIWGETETGR GVIDAGYVNP  300
HAQFSFLSVF GLKERDSKEA QMNEVTLQHL PRDVKPDTIT GNVFGSATSP YGGFKGM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	5e-78	G2-like family protein