PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR94682.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 241aa MW: 27519.1 Da PI: 9.3614 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 112.6 | 4.1e-35 | 16 | 150 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +GfrF+Ptdeelv +yLk+kv g+ + +++ ++++ykvePw+Lp v++e k +yfF++ ++k + g+++ r++ +g+Wk t d+++l+++ RWR94682.1 16 VGFRFKPTDEELVRYYLKEKVMGRLSPS-RTVVDAEVYKVEPWHLPGvppkhGVDEEAKVYYFFTRCNRKDKAGNKTDRSAGAGFWKVTCGDRPILDSH 113 8***********************9988.78999***********9547755555556677************************************** PP NAM 97 gelvglkktLvfy.....kgrapkgektdWvmheyrl 128 ++ +glk+ Lvf +++ k ++ +W+m+eyrl RWR94682.1 114 KRPIGLKRRLVFIhsrdkLNERVKNKSRNWIMQEYRL 150 *************665442455666789*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MTGSHNTGSS TESNMVGFRF KPTDEELVRY YLKEKVMGRL SPSRTVVDAE VYKVEPWHLP 60 GVPPKHGVDE EAKVYYFFTR CNRKDKAGNK TDRSAGAGFW KVTCGDRPIL DSHKRPIGLK 120 RRLVFIHSRD KLNERVKNKS RNWIMQEYRL PSEKVGGWVL CRIKESNRRV LEERNEDGEN 180 SMGATTGPVE EKQLQESCSG GLYGWNNNVG SMANLFGEEL SHCLEIWPGS STPTTLNKWI 240 H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77450.1 | 4e-31 | NAC family protein |