PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR94563.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WRKY
Protein Properties Length: 236aa    MW: 26905.2 Da    PI: 6.8761
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR94563.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY932.3e-2953111259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d ++++itY+ +Hnh+
  RWR94563.1  53 SDYWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERCRTDASMLIITYTCSHNHP 111
                 699***********************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MEYSSSTIPD LKPSKETRKE LQSSKRRKVM EKTVVTVKIE ENAGRQKGEG PPSDYWSWRK  60
YGQKPIKGSP YPRGYYRCST SKGCSAKKQV ERCRTDASML IITYTCSHNH PGPDVHTTPP  120
TQKTPQIKPF ENVPNSPQQT QPVTSEEHFN ESLLQSPINI SHGIYQEHPL IVLEKTQDPL  180
NLPFDGEEPL SYPHIMTLSA PKSEENDFFD ELEELPISSS FTSLMRSSFF DERVLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.17e-37WRKY family protein