PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR94503.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

CAMTA

Protein Properties

Length: 1163aa MW: 129814 Da PI: 7.9591

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR94503.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	178.3	9.9e-56	119	235	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 l+ k+rwl+++ei++iL n+++++lt +++++p+ gsl+L++rk +ryfrkDG+ w+kkkdgktvrE+hekLK g+v+vl+cyYah+e+n++fqrr+yw RWR94503.1 119 LEAKNRWLRPSEICEILRNYQRFQLTPDPPNKPPGGSLFLFDRKALRYFRKDGHRWRKKKDGKTVREAHEKLKAGSVDVLHCYYAHGEDNENFQRRSYW 217 5679********************************************************************************************* PP CG-1 101 lLeeelekivlvhylevk 118 +L+ +le+ivlvhy+evk RWR94503.1 218 MLDGQLEHIVLVHYREVK 235 *************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1163 aa Download sequence
MVLAELELAE LRSAWTMRWS WPRWCFPELR PNKLQVVAGK PGRGGRSDAT AELISVGGMT 60 EVVLAELAIL VLAWRVNTRA EMHVAEIIAA DDKGITRLRM ADGRRYAFSP QLDIEQILLE 120 AKNRWLRPSE ICEILRNYQR FQLTPDPPNK PPGGSLFLFD RKALRYFRKD GHRWRKKKDG 180 KTVREAHEKL KAGSVDVLHC YYAHGEDNEN FQRRSYWMLD GQLEHIVLVH YREVKEGSRS 240 GIPRLLNTDP EPLNHCQSAQ TSSAACSARA SSHALAVPPS NASSPSTANW NGQTPSSELE 300 DVDSGDDFDS SSFTEPTSCS GFQIASLHPN DTAERNQLGC SVAVSSFYSR GLTDATGIIG 360 GQINPNFVNQ GPTLNLLLNG GRLQADYRTT QETVGPYGLF KGGEDGRMFP CAHPQTSTKN 420 SLQENYKEEN LECAGYFPSD NRTGNDINHT HQVPHEQDFH ANTQFRSNCG SHMDVATNGQ 480 SSKFETENGQ GLPNVPESSL YNEHGELKKL DSFGRWMNNE IGKDCDDSLM ASDSHNYWNT 540 LDTQNDDKEV SSLSRQMQLD VDSLGPSLSQ VQLFSILDFS PDWAFSGFET KVLISGTFLG 600 GMENCNTARW CCMFGEVEVP AEVLATNVLR CHAPAHVPGR VPFYVTCSNR LACSEVREFE 660 YRDNPSETIS ILGVKGKSEE ELCLQIRFTK MILRGVDRKW LDCSVEKCDK CNLKKDTYSM 720 GSANENDWGK IKIAAKAMGK NHENPRKALM QKLLKDRLYE WLVCKAHEGG KGPNILDDKG 780 QGVIHLAAAL GYEWAMSPIV AAGISPSFRD SRGWTGLHWA AFFGREETIV ALVRLGAAPG 840 AVEDPTSKFP EGRTAADLAS SRGHKGIAGY LAEADLTSHP SSLTLNENLS GNVSVNLAAE 900 KAIETLVEQS VGDQEDCLSL RNSLAAVRNS AQAAARIQAA LSICSFRQRK LPKCDDENSE 960 ISSELITIAS MNKPQKVLHF SDSLHTAAVR IQQKYRGWKG RREFLKIRNR IVKIQAHVRG 1020 HQVRKQYKKV VWSVSIVEKA ILRWRRKGAG LRGFQADKAF RNMEPETGKT DEYEFLRVGR 1080 KQKVAGVEKA LARVQSMVRY REGRDQYMRL VTNFQKLQMG SEGASGKTQI SEESEIDANI 1140 HFYLKTTRKR MLSVQAIFLV TIG

Sequence ? help Back to Top

Protein Sequence Length: 1163 aa Download sequence

MVLAELELAE LRSAWTMRWS WPRWCFPELR PNKLQVVAGK PGRGGRSDAT AELISVGGMT  60
EVVLAELAIL VLAWRVNTRA EMHVAEIIAA DDKGITRLRM ADGRRYAFSP QLDIEQILLE  120
AKNRWLRPSE ICEILRNYQR FQLTPDPPNK PPGGSLFLFD RKALRYFRKD GHRWRKKKDG  180
KTVREAHEKL KAGSVDVLHC YYAHGEDNEN FQRRSYWMLD GQLEHIVLVH YREVKEGSRS  240
GIPRLLNTDP EPLNHCQSAQ TSSAACSARA SSHALAVPPS NASSPSTANW NGQTPSSELE  300
DVDSGDDFDS SSFTEPTSCS GFQIASLHPN DTAERNQLGC SVAVSSFYSR GLTDATGIIG  360
GQINPNFVNQ GPTLNLLLNG GRLQADYRTT QETVGPYGLF KGGEDGRMFP CAHPQTSTKN  420
SLQENYKEEN LECAGYFPSD NRTGNDINHT HQVPHEQDFH ANTQFRSNCG SHMDVATNGQ  480
SSKFETENGQ GLPNVPESSL YNEHGELKKL DSFGRWMNNE IGKDCDDSLM ASDSHNYWNT  540
LDTQNDDKEV SSLSRQMQLD VDSLGPSLSQ VQLFSILDFS PDWAFSGFET KVLISGTFLG  600
GMENCNTARW CCMFGEVEVP AEVLATNVLR CHAPAHVPGR VPFYVTCSNR LACSEVREFE  660
YRDNPSETIS ILGVKGKSEE ELCLQIRFTK MILRGVDRKW LDCSVEKCDK CNLKKDTYSM  720
GSANENDWGK IKIAAKAMGK NHENPRKALM QKLLKDRLYE WLVCKAHEGG KGPNILDDKG  780
QGVIHLAAAL GYEWAMSPIV AAGISPSFRD SRGWTGLHWA AFFGREETIV ALVRLGAAPG  840
AVEDPTSKFP EGRTAADLAS SRGHKGIAGY LAEADLTSHP SSLTLNENLS GNVSVNLAAE  900
KAIETLVEQS VGDQEDCLSL RNSLAAVRNS AQAAARIQAA LSICSFRQRK LPKCDDENSE  960
ISSELITIAS MNKPQKVLHF SDSLHTAAVR IQQKYRGWKG RREFLKIRNR IVKIQAHVRG  1020
HQVRKQYKKV VWSVSIVEKA ILRWRRKGAG LRGFQADKAF RNMEPETGKT DEYEFLRVGR  1080
KQKVAGVEKA LARVQSMVRY REGRDQYMRL VTNFQKLQMG SEGASGKTQI SEESEIDANI  1140
HFYLKTTRKR MLSVQAIFLV TIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	1e-160	CAMTA family protein