PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR94487.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

GeBP

Protein Properties

Length: 382aa MW: 42568.3 Da PI: 4.6117

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR94487.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	106.5	2e-33	110	211	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk......spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 fqrlw++eDei lL+G++d+++++ s d+ fy+++k + +++++k+qlveK+rrLKkK+++ v++++s k++sf+++h+q +fels+k RWR94487.1 110 IFQRLWTDEDEIGLLRGFLDYTSERRRrggrggSTNYDTGPFYDQIKTRFHLDFNKNQLVEKLRRLKKKYRNVVNRMASAKDFSFKTPHEQMTFELSRK 208 59*****************9987655556746666********************************************************** PP DUF573 95 iWg 97 iW RWR94487.1 209 IWS 211 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MPEVEDPNLF GDEIDEEEED EEYEDEIYDD VEEEKPKPQP QLHKRKHEEE EEAAAHDEKP 60 PIPQNPNPNF SSAIVVSSVH PLSSPDHKHQ KTSSASAAAA AADVEDSRRI FQRLWTDEDE 120 IGLLRGFLDY TSERRRRGGR GGSTNYDTGP FYDQIKTRFH LDFNKNQLVE KLRRLKKKYR 180 NVVNRMASAK DFSFKTPHEQ MTFELSRKIW SNSPLDDANE DRNGHFNAAE MKTPKNSDDP 240 GAAPAEMDDI LPEFTTPVTP PAPGSVPSVI EDAVRSCLSP LFKELLSCAM SGPSNLGVGG 300 VALNPLPLNL GGNSAHLMGG GVALNPLPLN FGGNSVNLTG SEAVDERWRK QQILELEVYS 360 KRLELVQEQI KLALEELKSV GS

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MPEVEDPNLF GDEIDEEEED EEYEDEIYDD VEEEKPKPQP QLHKRKHEEE EEAAAHDEKP  60
PIPQNPNPNF SSAIVVSSVH PLSSPDHKHQ KTSSASAAAA AADVEDSRRI FQRLWTDEDE  120
IGLLRGFLDY TSERRRRGGR GGSTNYDTGP FYDQIKTRFH LDFNKNQLVE KLRRLKKKYR  180
NVVNRMASAK DFSFKTPHEQ MTFELSRKIW SNSPLDDANE DRNGHFNAAE MKTPKNSDDP  240
GAAPAEMDDI LPEFTTPVTP PAPGSVPSVI EDAVRSCLSP LFKELLSCAM SGPSNLGVGG  300
VALNPLPLNL GGNSAHLMGG GVALNPLPLN FGGNSVNLTG SEAVDERWRK QQILELEVYS  360
KRLELVQEQI KLALEELKSV GS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	1e-63	GeBP family protein