PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR94439.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 511aa MW: 55814 Da PI: 8.6304

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR94439.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.9	1.4e-30	269	327	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gC+v+k+v+r+aed++++++tYeg+Hnh+ RWR94439.1 269 NDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCSVRKQVQRCAEDKTILITTYEGNHNHP 327 8*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MDRPPEMALL HPSAGDIFRL NSGNFDRQPD NLTGRQHDMI KEMDFFSENH TGRRGKAVRL 60 SSQDHDSKDG SMKIDAGIST GLHLLTMNSS GSEQSQVEKR PKNKLIALKM EIVRISEENQ 120 KLRSMFEQLT RNYTALQNQL VLKMRDHQQQ QKEGGKTNMS NHRLLAQQLM DPGPSGALDM 180 DEPSHSGDHE TRELSPSPSN NADEASDNMI PITRKRQIVE DGFDQTSQSW EAKKGPKLTP 240 SKNTDQTSEF PIRKARVSVR ARSEAPMIND GCQWRKYGQK MAKGNPCPRA YYRCTMAVGC 300 SVRKQVQRCA EDKTILITTY EGNHNHPLPP AATAMANTTS AAATMLLSCS TTSKESLSSP 360 TFFPSLHYPS PLATLSASAP FPTITLDLTQ TPNPMQFQRN PSLLTPFPMA LSACPQLLGQ 420 PMYLGTKLPT VPPMQCGNPS LTEAVTAAIT TDPNLTAALA AAITSIMGIP QNNPNVNNTN 480 NGNGNGGSPS RQPGIPGSPQ IPQSCTTFTT S

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MDRPPEMALL HPSAGDIFRL NSGNFDRQPD NLTGRQHDMI KEMDFFSENH TGRRGKAVRL  60
SSQDHDSKDG SMKIDAGIST GLHLLTMNSS GSEQSQVEKR PKNKLIALKM EIVRISEENQ  120
KLRSMFEQLT RNYTALQNQL VLKMRDHQQQ QKEGGKTNMS NHRLLAQQLM DPGPSGALDM  180
DEPSHSGDHE TRELSPSPSN NADEASDNMI PITRKRQIVE DGFDQTSQSW EAKKGPKLTP  240
SKNTDQTSEF PIRKARVSVR ARSEAPMIND GCQWRKYGQK MAKGNPCPRA YYRCTMAVGC  300
SVRKQVQRCA EDKTILITTY EGNHNHPLPP AATAMANTTS AAATMLLSCS TTSKESLSSP  360
TFFPSLHYPS PLATLSASAP FPTITLDLTQ TPNPMQFQRN PSLLTPFPMA LSACPQLLGQ  420
PMYLGTKLPT VPPMQCGNPS LTEAVTAAIT TDPNLTAALA AAITSIMGIP QNNPNVNNTN  480
NGNGNGGSPS RQPGIPGSPQ IPQSCTTFTT S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	4e-79	WRKY family protein