PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR94404.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family CAMTA
Protein Properties Length: 1150aa    MW: 128854 Da    PI: 7.1359
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR94404.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-11772.4e-55201362118
        CG-1   2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100
                 l+ ++rwl+++e+++iL n++++ lt e++++p+sgsl+L++rk +ryfrkDG++w+kkkdgktvrE+hekLK g+v+vl+cyYah+e+n++fqrr+yw
  RWR94404.1  20 LEAQNRWLRPSEVCEILCNYQNFCLTPEPPNKPPSGSLFLFDRKTLRYFRKDGHNWRKKKDGKTVREAHEKLKSGSVDVLHCYYAHGEDNENFQRRSYW 118
                 5679*********************************************************************************************** PP

        CG-1 101 lLeeelekivlvhylevk 118
                 lL+ +le+ivlvhy+evk
  RWR94404.1 119 LLDGQLEHIVLVHYREVK 136
                 ***************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1150 aa     Download sequence    
MADRRRYALN PQLDIEQILL EAQNRWLRPS EVCEILCNYQ NFCLTPEPPN KPPSGSLFLF  60
DRKTLRYFRK DGHNWRKKKD GKTVREAHEK LKSGSVDVLH CYYAHGEDNE NFQRRSYWLL  120
DGQLEHIVLV HYREVKEGNR SGIPRLLSTR PGTLNFTGSA QTGLTASSAQ ENSPALATKL  180
SYASSPSTVN WNGQTASSEF EDVDSGDDFG MSSLTRPTSS SVFHNSSLHQ NDMAGNQLAS  240
RGDMSSPYPR GLTDTTVSFG TSINPYRVNQ LPTLNLVSDE GRQAGYRSSQ EAGLPGLSRK  300
NIGASFSPDT GLWPEHHKSN GKSTSTYEQK ILFDLTDDAH VITEEVIDYT VGPYCTVKDS  360
QDGRISPPPD PRTFTRNLLQ ENYKEQNVGH AGYFPSNNHT ENDIGLPYQV PHEQNFHSST  420
QFQSNGGSHM NAATNGQPLG LETDDGQYLK NAPENCLYNE HGKLKKLDSF GRWMNNEISR  480
DCDDSLMASD SCNYWNTLET QNDNKEVSSL SHHMQLNVES LAPSLSQEQL FSILDFSPDW  540
AYSGFDTKVL ISGTFLGGIE NPNNARWCCM FGEVEVPAEV LAVNTLRCQA PAHVPGRVPF  600
YVTSSDRLAC SEVREFEYRE KPLSVAFSSI KPQEEVHLLI RFAKMLLQGF DRKWLDCTLE  660
KCENCKLKTE IFSRRHADEN DWDKIEIACK AMEKHKENPR EALMQKLLED SLYEWLVCKA  720
HEEGKVPNIL DAEGQGVIHL AAALGYEWAM DPIVAAGISP SFRDAHGWTG LHWAAYFGRE  780
ETVVALLKLG SAPGAVEDPT AKFPQGRTAA DVASSRGHKG IAGYLAETYL TGHLSLLTLK  840
SNAMDSVSVN ASAETAVETV EEQSVIPLDG DQEDQLSFRG SLAAVRKSTQ AAARIQAAFR  900
IHSFRQRQLT KCHDDSSEIP SELIAIASLN KPQNLGHFSP SLHSAAVRIQ QKYRGWKGRK  960
EFIKIRNRIV KIQAHVRGHQ VRKQYKKVVW SVSIVEKAIL RWRRKGAGLR GFRADEAIKH  1020
MEPETGKIDE YEFLRVGRKQ KVAGVEIALA RVQSMVRYRE GRDQYMRLLT NFQKLKMDDK  1080
GSTSSKSEVL IGSAASAGSP DSFIPARWTW IKILMQLRCL VNMALLRTLT AVESTQGGVV  1140
EQFDTGNNIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.21e-155CAMTA family protein