PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR94353.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 289aa MW: 33167.2 Da PI: 6.9885 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.5 | 7.6e-19 | 23 | 70 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd++lv++++ +G g+W++ ar+ g++Rt+k+c++rw++yl RWR94353.1 23 RGPWTMEEDLILVNYIADHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 70 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.2 | 3.3e-17 | 76 | 119 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ RWR94353.1 76 RGNITPEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 119 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 289 aa Download sequence |
MDGHGRGGCS SETQSEEEMD LRRGPWTMEE DLILVNYIAD HGEGRWNSLA RCAGLKRTGK 60 SCRLRWLNYL RPDVRRGNIT PEEQLLILEL HSRWGNRWSK IAQHLPGRTD NEIKNYWRTR 120 VQKHAKQLKC DVNSKQFKDA MRYLWMPRLV ERIRAASAAS GSTQNTPTTL QNLPAYQPLT 180 SICNDFGVPQ VKPNITPENS STDSFVTTNT HVVSPISDLT DYYFHGNHNG FQTAPVSCPE 240 SLLSPSGSFY HGFELPPTEQ NVWFGMDPPE NTWNMEDIWL LQQQQQQMC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G49620.1 | 3e-95 | MYB family protein |