PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR94341.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family WRKY
Protein Properties Length: 313aa    MW: 34455.1 Da    PI: 6.2686
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR94341.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY108.53.2e-34162219259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dgy+WrKYGqK vk+s+fprsYYrCtsa C vkk+vers+edp++v++tYeg+H+h+
  RWR94341.1 162 EDGYRWRKYGQKAVKNSPFPRSYYRCTSAMCGVKKRVERSSEDPTIVVTTYEGQHTHP 219
                 8********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MERKREEAME TENSTGFSSF PDQIPTNYPF SGGLFDFPGD ISGAGKTSSS MGFMELLGFQ  60
DPTTPVFDFP PPPPPATSLP ESSDMGNLPA TPNSSSISSS STEAANEEQA KVAEGEVEEE  120
GVGGGEQEEK TKKQSKPKKK TQKREREPRY AFMTKSEVDH LEDGYRWRKY GQKAVKNSPF  180
PRSYYRCTSA MCGVKKRVER SSEDPTIVVT TYEGQHTHPS PVVPRGSSAV LPRDPGGFPN  240
SAGVLPMQTT QSHYQHPYFF SLPSPSLNYS SGASTASFLR DRRYCTTSSA SLLRDHGLLQ  300
DILPSDVRKE EPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.16e-48WRKY family protein