PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR94243.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ARR-B
Protein Properties Length: 737aa    MW: 81218.9 Da    PI: 5.5527
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR94243.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like87.71.1e-27213266155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 kpr++Wt eLH++Fv av+qL  ++kA+Pk+ilelm+v+gLt+e+v+SHLQkYR+
  RWR94243.1 213 KPRVVWTAELHQQFVAAVNQL-SIDKAVPKKILELMNVPGLTRENVASHLQKYRS 266
                 79*******************.9*******************************7 PP
2Myb_DNA-binding40.85.1e-13215265148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  WT+e+++++v av+ql  +   +k+I + m+  g+t++++ s++qky+
       RWR94243.1 215 RVVWTAELHQQFVAAVNQLSIDkaVPKKILELMNvPGLTRENVASHLQKYR 265
                      678***********************************************7 PP
3Response_reg74.15.3e-25321401109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl+vdD+p+ +++l+++l++  y ev++++ +  al +l+e++  +Dl++ D+ mp+mdG++ll++i  e  +lp+i+++a + ++ + + +  Ga 
    RWR94243.1  32 VLVVDDDPICLMILEKMLRNCLY-EVTTCSRAVVALSMLRERKggFDLVMSDVYMPDMDGFKLLEHIGLEM-DLPVIMMSADDGKDVVMKGVTHGAC 126
                   89*********************.***************999999**********************6654.8************************ PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   d+l Kp+ +e++ +
    RWR94243.1 127 DYLIKPVRIEAIKN 140
                   *********99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 737 aa     Download sequence    
MGGGGTLSNG ISACSRRICE GISDQFPAGL RVLVVDDDPI CLMILEKMLR NCLYEVTTCS  60
RAVVALSMLR ERKGGFDLVM SDVYMPDMDG FKLLEHIGLE MDLPVIMMSA DDGKDVVMKG  120
VTHGACDYLI KPVRIEAIKN IWQHVVRKRR NELKDLEQSG SAEDSDRNRK QLEDSDYASS  180
ANEGSWRYSK KRKDSRDEED EGEDHEDSST LKKPRVVWTA ELHQQFVAAV NQLSIDKAVP  240
KKILELMNVP GLTRENVASH LQKYRSYLRR LSGVPQLDGG VNSSFVGTPE TTIGSVSSLG  300
LDLQQALAIS NQRPPHNIAA IGLRSTTATP SMGISIPDQM NHFSDEQIAN ASNIRYGPGE  360
QMGNKQVNLL HGIPINMEPK QLMHLYQPIE SFENMSLQGS EEMSNFLTSP TSLRTSSSSQ  420
RDIFHGHQNS SSMMQMPRQG HQLPDSQSQS KMQVDISEHM QSRGMSLNEN AGGHNLELPS  480
SVGQQLISNE NLGRVSERNA IVMNGRGTSS GGTCIYNPSY LAVSQASSVD FPFCHTMELT  540
GNGFDLASTN GLSSFPSTRM FEVMPAIGNL EGLENGTSLK ASSDVVPSYN HFNEHHIKNE  600
DWELQNSNIT YDVTQHMNSM TSNPDFSPSA LGHQCLTAGQ HGRQNRITHF SGKGMVSQSA  660
ENECGHPESI AQCHNNLVVD SSFRVKAGSL GNINRESMLV NQNFAQEDLI NAFLKQQQGV  720
RGEAELNFDG YSVEIPE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-132ARR-B family protein