PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR94196.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | ERF | ||||||||
Protein Properties | Length: 226aa MW: 25194.4 Da PI: 9.0133 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66 | 7.7e-21 | 71 | 120 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+W+AeIrdp+ + +r++lg+f ta+eAa a+++a+kk++g+ RWR94196.1 71 YRGVRQRP-WGKWAAEIRDPV----KgARVWLGTFNTAQEAAMAYDHAAKKIRGH 120 9*******.**********75....44**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MCGGAIISDL LLLDFKDNIG ACGDLDQTSF KPEGLIQSLS AGKQGNISSK NRVPKGAEEK 60 KKKKRALKHL YRGVRQRPWG KWAAEIRDPV KGARVWLGTF NTAQEAAMAY DHAAKKIRGH 120 KAKLNFPLTK PTPTNSVPNS DIPNPNSLTR PNVNYLYQEL SFPKEEPNPP SFQSFSEMDT 180 NVGWNERISS LESFLGLDHE SGESVTSDYS VDVWLSDDAV TRHLFY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 5e-36 | ERF family protein |