PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR93881.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 301aa    MW: 34012.1 Da    PI: 7.1492
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR93881.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM178.91.3e-5571321128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lppGfrFhPtdeel+++yL++kv++ ++ +  +i +vd++k+ePwdLp+k++ +ekewyfFs +d+ky+tg r+nrat++gyWk+tgkdke+++ +g++
  RWR93881.1   7 LPPGFRFHPTDEELITYYLTRKVSDYNFVE-GAIVDVDLNKCEPWDLPAKASMGEKEWYFFSLKDRKYPTGLRTNRATEAGYWKTTGKDKEIHH-SGRV 103
                 79*************************888.89***************999999****************************************.999* PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                  g+kktLvfykgrapkgek++Wvmheyrl
  RWR93881.1 104 AGMKKTLVFYKGRAPKGEKSNWVMHEYRL 132
                 ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MEGSLSLPPG FRFHPTDEEL ITYYLTRKVS DYNFVEGAIV DVDLNKCEPW DLPAKASMGE  60
KEWYFFSLKD RKYPTGLRTN RATEAGYWKT TGKDKEIHHS GRVAGMKKTL VFYKGRAPKG  120
EKSNWVMHEY RLQTKFSYKP TKEEWVVCRV FQKSSTAKSS SYSPSAFPTI ESCSDTNLMD  180
ELGEINMANL SSLVSSSSSF NTISPNNDDK HMNMNVNWGH TNYQSLVCPP SMLNSKFSPT  240
NSSILRAMQL NSFHQSEAMD TSINPFAAQV ECFGTNLSTN FSSSGTKNMD CAAQQEQESI  300
W
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.17e-96NAC family protein