PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR93372.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | SBP | ||||||||
Protein Properties | Length: 183aa MW: 20737.2 Da PI: 9.7937 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 135.1 | 2.2e-42 | 61 | 137 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cq+e+C++dl++ak+yhrrhkvCe+hsk+pvv+v+gl+qrfCqqCsrfhelsefDe+krsCrrrLa+hnerrrk+++ RWR93372.1 61 CQAEKCAVDLTDAKRYHRRHKVCEQHSKSPVVIVAGLRQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKNSS 137 **************************************************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MESKAEAKEK AKKEVFEDEK EDEEDGGGAA TEDEKKKRVT ATAASPSLKK GGMNHLQAPS 60 CQAEKCAVDL TDAKRYHRRH KVCEQHSKSP VVIVAGLRQR FCQQCSRFHE LSEFDEAKRS 120 CRRRLAGHNE RRRKNSSESH LEGSSRRAVG PQLKENHCRQ ADQSGRTQLT LPGSPPYKHF 180 QIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53160.1 | 3e-44 | SBP family protein |