PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR93156.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 189aa MW: 21498.3 Da PI: 9.7222

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR93156.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	82.1	5.5e-26	114	168	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s++pr Ct+++C+vkk+v+r ++d+++v++tYeg Hnh+ RWR93156.1 114 LDDGYRWRKYGQKAVKNSNYPR----CTHHTCNVKKQVQRLSKDTSIVVTTYEGVHNHP 168 59**************9995....******************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MEEGAPSNHN IPFFFSSPLE EPSSQNYLFY PSQPQPSYQE GSLPPLDTVD WAAILSGTDQ 60 KKLNAENTLE TMAMRRAEQG VVGATSKEKG KMNRAKKATR PRFAFQTRSA NDILDDGYRW 120 RKYGQKAVKN SNYPRCTHHT CNVKKQVQRL SKDTSIVVTT YEGVHNHPCE KLMESLSPLL 180 KQIQFLARF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46130.2	1e-52	WRKY family protein