PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR93101.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 402aa MW: 45049 Da PI: 7.9009 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168 | 3.1e-52 | 14 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 + pGfrFhPtdeelv +yLk+k+++++l++ e i+++diyk++PwdLp + ++++ekewyf+++rd+ky++++r+nr+t +g+Wkatg+d++++s+ ++ RWR93101.1 14 MLPGFRFHPTDEELVGFYLKRKIQQRPLSI-ELIRQLDIYKYDPWDLPrELATTGEKEWYFYCPRDRKYRNSTRPNRVTGAGFWKATGTDRPIYSSeGT 111 579***************************.89***************556667899**************************************9566 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + +glkk+Lvfykgra kg ktdW+mhe+rl RWR93101.1 112 KCIGLKKSLVFYKGRAAKGIKTDWMMHEFRL 142 67***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 402 aa Download sequence |
MDERNDVDKS DEVMLPGFRF HPTDEELVGF YLKRKIQQRP LSIELIRQLD IYKYDPWDLP 60 RELATTGEKE WYFYCPRDRK YRNSTRPNRV TGAGFWKATG TDRPIYSSEG TKCIGLKKSL 120 VFYKGRAAKG IKTDWMMHEF RLPSSTDSTM NKRPLDKNIP ANDSWAICRI FKKTNSMAQR 180 ALSHSWVSPF PADSTSSDIF SHSAHNTKLT SDNISCTTEA LSTIQFCCNN LSQSATNFSL 240 LDVPFYKPIN STVSKPPLPP ILNAETSSGF MFPTVDMSMP TKCTADVTSM LLNMPPSILG 300 DAGKASVSVD SGLQQQCNIF TISIPPELHA NVDSSVEEPS TRKNTNAGHD GNQWGAMRTV 360 GFPFSLPMSL SDAWKLNMPW DSPAPCPSEM SSSFSTNKCY TQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G26870.1 | 1e-106 | NAC family protein |