PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR93088.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 279aa MW: 32005.9 Da PI: 6.0496 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.9 | 7.5e-18 | 79 | 131 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++ +q+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k RWR93088.1 79 KKRLNMDQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 131 556899**********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 128.4 | 2.9e-41 | 77 | 169 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekk+rl+ +qvk+LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy++Lkr+++a+k++ne+L++++++L++e+++ RWR93088.1 77 EKKKRLNMDQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKADNESLQAKNNKLQAEISA 169 69**************************************************************************************99975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MTCNEMAFFT SNFMLQTHEQ DLPSTSFNQI LPSCTPQDFH GVASLLGKRS MSFSGIEGCE 60 EMNCDDELSD DCSQAGEKKK RLNMDQVKTL EKNFELGNKL EPERKMQLAR ALGLQPRQIA 120 IWFQNRRARW KTKQLEKDYD VLKRQFEAMK ADNESLQAKN NKLQAEISAL KSRETTEPIN 180 LNKETEGSCS NRSENSSDIN LDLSRTSATD SPLSSNPNRH LFPSMRPTAV AHLLHNTTRS 240 ELQCPKIEHP VQEESFCNMF MGMDDHSGFW PWPEHHNFQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 126 | 134 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 1e-104 | HD-ZIP family protein |