PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR92980.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 268aa    MW: 31319.6 Da    PI: 7.4912
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR92980.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM149.71.4e-46111373128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99 
                 pGfrF Pt+eel+++yLk  + gk+ +  +vi +v+iy+++Pw+Lp  +k +e+ewyfF++rdkk+++g r+nr+t++g+Wkatg+d++++s    +++
  RWR92980.1  11 PGFRFYPTEEELLDFYLKGVLYGKRPTS-QVIGTVNIYHHDPWELPGLAKIGEREWYFFVPRDKKNTHGGRPNRTTETGFWKATGSDRRIHSMkdPKRV 108
                 9************************777.99***************8888899*************************************998666778 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 +g++ktLvfykgrap+g ktdW+m+eyr+
  RWR92980.1 109 IGIRKTLVFYKGRAPRGCKTDWIMNEYRM 137
                 ***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MDRALYEQEL PGFRFYPTEE ELLDFYLKGV LYGKRPTSQV IGTVNIYHHD PWELPGLAKI  60
GEREWYFFVP RDKKNTHGGR PNRTTETGFW KATGSDRRIH SMKDPKRVIG IRKTLVFYKG  120
RAPRGCKTDW IMNEYRMPEN YPMPKEDIVL CKVYRKATSM KVLEQRAASE EYKGFSQGDV  180
SALMDMVSSP EEQSLQLTAS PKEEESNEKG INGKESEATS RQMQMSCVKE SLPQLELPSY  240
NLEWMQDPYL FRSPWLENWS PYVNVLNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.11e-97NAC family protein