PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR92951.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Nin-like

Protein Properties

Length: 980aa MW: 108441 Da PI: 5.3504

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR92951.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	51.4	2.1e-16	661	709	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sle+l++yF++++kdAAk++g l ++K Rq+GI+RWP+Rkik++ RWR92951.1 661 EKTVSLEVLRQYFAGSLKDAAKSIGGKLHTIKV--RQHGINRWPSRKIKKV 709 899********************99999996..9***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 980 aa Download sequence
MEDALSPRNT MSGTLSNGTN MDFDFMDELL SEGCWLETTA CSNLFQQGDF TSATLLDSSC 60 FSPTSDTYNN SSDPNTPQNV CHDDTENTFF SGSLLHPAET QTETFGGNQS LDHNMTRAAE 120 SSGQLVSYPV QESRNLDGKG MINPSLELSR RWWIEPRANQ SPASSVKERL LHALRYIRES 180 TKDGDVLVQI WVPTNREGRN VLTTSGQPFS LNPYCQRLVK YRTISTNYLF SAEEDSSMAI 240 GLPGRVFLGR LPEWTPDVRY FSSEEYPRVD FAQRYDVRGT LALPVFERGS QACLGVVEVV 300 MTTQNIDYHP ELENICNALQ AVDLSTSEVF SIPHPKVPSD SYQVILPEII EVVRAVCETH 360 RLPLAQTWVP CIQQGKKGSR HTDKNYADCV STVDAACCIS DPRIWGFHYA CSEHHLFRGQ 420 GLVGKAFTTN QPCFSTDVTA FSKTEYPLSH YARMFGLQAA VAIRLRSLYS GTADYVLELF 480 LPVDCINNEE QKLMLNSLSV IIQQVCQSLR VVTDKELEDE TVSSVNKAIP LGWMLERSTS 540 SGKPNGEEVS EMGATPSIDT SAGKSSGISS VIQAQEKGKS VLHPASLSLE FQEQESEEYN 600 VPSHWDPAEV DLHTGKIFSD VKQQQRQGLS RDNVEGGDSS FGKPRIENSG NETEKRRTKS 660 EKTVSLEVLR QYFAGSLKDA AKSIGGKLHT IKVRQHGINR WPSRKIKKVG NSLRKLQVVI 720 NSVQGAEGVV QISSLYKGFP KTYGSGLTSE NPARGDTLST LEQTSHLKSS NAQPEGAFSN 780 VAPEKSQTSS CSQSSSSGLS CSTVAQSHSL ATLVNEDASK AENGSCMLKR AYSEAELHAL 840 SKDEETRPPS RSLSHKSLSE HPSLGGPFYL PMSIPLSQDC NSVRVKVTYG EEKVRFSLQP 900 SWGFQDLLRE IARRFNIDDV SVMDVKYLDD DFEWVLLTCD ADLEECKEIY KSSSVQPMKL 960 SVHLVAQPDP RNSWGSTALS

Sequence ? help Back to Top

Protein Sequence Length: 980 aa Download sequence

MEDALSPRNT MSGTLSNGTN MDFDFMDELL SEGCWLETTA CSNLFQQGDF TSATLLDSSC  60
FSPTSDTYNN SSDPNTPQNV CHDDTENTFF SGSLLHPAET QTETFGGNQS LDHNMTRAAE  120
SSGQLVSYPV QESRNLDGKG MINPSLELSR RWWIEPRANQ SPASSVKERL LHALRYIRES  180
TKDGDVLVQI WVPTNREGRN VLTTSGQPFS LNPYCQRLVK YRTISTNYLF SAEEDSSMAI  240
GLPGRVFLGR LPEWTPDVRY FSSEEYPRVD FAQRYDVRGT LALPVFERGS QACLGVVEVV  300
MTTQNIDYHP ELENICNALQ AVDLSTSEVF SIPHPKVPSD SYQVILPEII EVVRAVCETH  360
RLPLAQTWVP CIQQGKKGSR HTDKNYADCV STVDAACCIS DPRIWGFHYA CSEHHLFRGQ  420
GLVGKAFTTN QPCFSTDVTA FSKTEYPLSH YARMFGLQAA VAIRLRSLYS GTADYVLELF  480
LPVDCINNEE QKLMLNSLSV IIQQVCQSLR VVTDKELEDE TVSSVNKAIP LGWMLERSTS  540
SGKPNGEEVS EMGATPSIDT SAGKSSGISS VIQAQEKGKS VLHPASLSLE FQEQESEEYN  600
VPSHWDPAEV DLHTGKIFSD VKQQQRQGLS RDNVEGGDSS FGKPRIENSG NETEKRRTKS  660
EKTVSLEVLR QYFAGSLKDA AKSIGGKLHT IKVRQHGINR WPSRKIKKVG NSLRKLQVVI  720
NSVQGAEGVV QISSLYKGFP KTYGSGLTSE NPARGDTLST LEQTSHLKSS NAQPEGAFSN  780
VAPEKSQTSS CSQSSSSGLS CSTVAQSHSL ATLVNEDASK AENGSCMLKR AYSEAELHAL  840
SKDEETRPPS RSLSHKSLSE HPSLGGPFYL PMSIPLSQDC NSVRVKVTYG EEKVRFSLQP  900
SWGFQDLLRE IARRFNIDDV SVMDVKYLDD DFEWVLLTCD ADLEECKEIY KSSSVQPMKL  960
SVHLVAQPDP RNSWGSTALS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein