PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR92943.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WOX

Protein Properties

Length: 282aa MW: 31853.7 Da PI: 6.5163

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR92943.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	67.8	1.4e-21	99	159	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ Fe+ n +ps++++++++++l +++e++V++WFqNrRa+ k+ RWR92943.1 99 RQRWTPTPVQLQILENIFEQgNGTPSKQRIKDITSELtqhgHISETNVYNWFQNRRARSKR 159 89***************99************************************97 PP
2	Wus_type_Homeobox	100.1	1.7e-32	98	161	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp Q++iLe+++++G tP+k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq RWR92943.1 98 ARQRWTPTPVQLQILENIFEQGNGTPSKQRIKDITSELTQHGHISETNVYNWFQNRRARSKRKQ 161 689***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MGVVANACKE EKEEEKARKK MQQQEQEQQQ QGGLYVKVMT DEQLEVLRKQ ISVYATICDE 60 LVKLHKALTA QQDSLSGMRV GNMYCDPLMT PGGHKINARQ RWTPTPVQLQ ILENIFEQGN 120 GTPSKQRIKD ITSELTQHGH ISETNVYNWF QNRRARSKRK QLQPLPNNAE SEVETETDSP 180 KEKKAKADNM HPHEISAPGV DDLCFRSTEY SSEVHSLDQQ PSKPQGAFPL NDTLKSSGGM 240 SRGSFYESML SNPRIDHQLM GKIEVPGSYN PFQTGEGYDM IG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	153	161	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	1e-75	WOX family protein