PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR92908.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 617aa MW: 71300.9 Da PI: 5.6835

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR92908.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.6	1.9e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhPtdeelv +yLk+k++g+++el e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nrat++gyWkatgkd++v+s + RWR92908.1 6 LPPGFRFHPTDEELVGYYLKRKINGHTIEL-EIIPEVDLYKCEPWDLPeKsFLPSKDLEWYFFSPRDRKYPNGSRTNRATRTGYWKATGKDRKVMS-QL 102 79**************************.99**********95334455777**********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++vg+kktLv+y+grap+g++tdWvmheyrl RWR92908.1 103 RAVGMKKTLVYYRGRAPHGSRTDWVMHEYRL 133 99*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MAPVTLPPGF RFHPTDEELV GYYLKRKING HTIELEIIPE VDLYKCEPWD LPEKSFLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATRTGYWK ATGKDRKVMS QLRAVGMKKT LVYYRGRAPH 120 GSRTDWVMHE YRLDERECET PSGLQDAYAL CRVFKKSATA PKILEQYSGH YDHSKWMPNH 180 HSPIMDLSSE RRDENSDHFF PSETSSFDMN AHGDWTRMQS LAEEVLGFID PPFHNTGSLA 240 QAQSKVNIAL ESEKLQQWLS LPPLEMDDYP QINLTGSKIQ HSEYLQLEDP KERDILQELL 300 SVTYNSQELP NQSHYHDKWQ GHCPAMEEFS ALCEQGISGH VEEKKGQISE LGSSRFIERS 360 HKVEENIRFI EVGDLEEEFK EERVVENLQG ENMSNTDLGK TTFEDHRALI EGTSVYQRSE 420 EPDHKGGTNI RQDIFKNNDM ESKPNCLEYQ STYCPFGLIN NTNEIFLEDG GVNEFADTSI 480 FDIYESVEFN RGLLISSHNV AETFFHHIEP SKTVSFHLNN IDEQDVIIPK TEQVRKGQKR 540 SSLFNNFKAF SVDTFMWVKL SMRPWMRSYS VSRMTNYVVN TAALLSASGL NLGETAKVVC 600 WWSTLSNDKT MAKKLIK

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MAPVTLPPGF RFHPTDEELV GYYLKRKING HTIELEIIPE VDLYKCEPWD LPEKSFLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATRTGYWK ATGKDRKVMS QLRAVGMKKT LVYYRGRAPH  120
GSRTDWVMHE YRLDERECET PSGLQDAYAL CRVFKKSATA PKILEQYSGH YDHSKWMPNH  180
HSPIMDLSSE RRDENSDHFF PSETSSFDMN AHGDWTRMQS LAEEVLGFID PPFHNTGSLA  240
QAQSKVNIAL ESEKLQQWLS LPPLEMDDYP QINLTGSKIQ HSEYLQLEDP KERDILQELL  300
SVTYNSQELP NQSHYHDKWQ GHCPAMEEFS ALCEQGISGH VEEKKGQISE LGSSRFIERS  360
HKVEENIRFI EVGDLEEEFK EERVVENLQG ENMSNTDLGK TTFEDHRALI EGTSVYQRSE  420
EPDHKGGTNI RQDIFKNNDM ESKPNCLEYQ STYCPFGLIN NTNEIFLEDG GVNEFADTSI  480
FDIYESVEFN RGLLISSHNV AETFFHHIEP SKTVSFHLNN IDEQDVIIPK TEQVRKGQKR  540
SSLFNNFKAF SVDTFMWVKL SMRPWMRSYS VSRMTNYVVN TAALLSASGL NLGETAKVVC  600
WWSTLSNDKT MAKKLIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-118	NAC family protein