PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR92848.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 474aa MW: 52428.2 Da PI: 5.8074

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR92848.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.3	2.1e-30	206	265	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ RWR92848.1 206 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCMEDMSILITTYEGTHNHP 265 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MMQIDLSLKI ADEDGGEDFP VDEQKEERED DNKDKVGDDE QQEASSSQQS IQEILKTDEI 60 YTLQTEINRM KEENKELRKV VEQKMRDYRN LQMKFAFVRK SGQENDNPII LSLGSDVGSK 120 GAHEVKNQSP SQVDEIREDK GLGLSLRLHT QIDQHEENRE EMKAWVATDD MLHKSNLGGI 180 TSHKTSAMAN RKSRVSVRAR CQASTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV 240 RKQVQRCMED MSILITTYEG THNHPLPVGA TAMASTTNAP GTFMLMSGEE GSTSPISSSI 300 DNLGQVRLSY PNPYLNNIIN STPPRGVVLD LSHNTHHLQQ QLAFPSSSHS ELKFKYPWAS 360 DNLSYSNSIA SSSDGASFQF SNSWGTDKKR SWSVEDDKSL AENVSGIASD PNFAVAVAAA 420 ITSFIGKESQ TAQTTAPALV LKDGERASTS SNKWAVESLS PSGKAQAFVE KDPH

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MMQIDLSLKI ADEDGGEDFP VDEQKEERED DNKDKVGDDE QQEASSSQQS IQEILKTDEI  60
YTLQTEINRM KEENKELRKV VEQKMRDYRN LQMKFAFVRK SGQENDNPII LSLGSDVGSK  120
GAHEVKNQSP SQVDEIREDK GLGLSLRLHT QIDQHEENRE EMKAWVATDD MLHKSNLGGI  180
TSHKTSAMAN RKSRVSVRAR CQASTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV  240
RKQVQRCMED MSILITTYEG THNHPLPVGA TAMASTTNAP GTFMLMSGEE GSTSPISSSI  300
DNLGQVRLSY PNPYLNNIIN STPPRGVVLD LSHNTHHLQQ QLAFPSSSHS ELKFKYPWAS  360
DNLSYSNSIA SSSDGASFQF SNSWGTDKKR SWSVEDDKSL AENVSGIASD PNFAVAVAAA  420
ITSFIGKESQ TAQTTAPALV LKDGERASTS SNKWAVESLS PSGKAQAFVE KDPH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	1e-75	WRKY family protein