PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR92824.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | bHLH | ||||||||
Protein Properties | Length: 230aa MW: 25303 Da PI: 7.1804 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.4 | 5.4e-08 | 131 | 171 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR++i +++ L++l+P K++ a++L +A++Y+k L RWR92824.1 131 ARHRREKISERIRILQRLVPGG-----MKMDTASMLDEAIRYVKFL 171 699*****************96.....6****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MDGCSSSWDM AMGNQCPIHP LPFEVLNSMK DPLQAHCLPS SSHVLYSSIG IHEIPPPPLP 60 PPISSNRVSN SSFSIEHKGN NIEGGEEELC AMKEMMYKIA VMQPVDIDPA TIQKPKRRNV 120 RISDDPQSVA ARHRREKISE RIRILQRLVP GGMKMDTASM LDEAIRYVKF LKRQVKELQI 180 GQQSPHGGPV ATGNWQIGPI DIGSSSSLGP PGGARFDLPE MANVTNFSDQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00120.1 | 9e-48 | bHLH family protein |