PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR92811.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 480aa MW: 53250 Da PI: 5.1416

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR92811.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	161	4.7e-50	6	133	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhPtd elv++yLkkkv gk + e i+e+++yk+ PwdLp k ++k+++ ewyfF++rd+ky++g r+nrat+ gyWk+tgkd++v++ ++ RWR92811.1 6 LPPGFRFHPTDVELVMYYLKKKVMGKL-GF-EGISEIELYKFSPWDLPeKsCLKSRDLEWYFFCPRDRKYSNGPRANRATDIGYWKTTGKDRSVCH-NS 101 79********************998.33.67**********95357778888**********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrle 129 ++vg+kktL+f+ grap+g +t+Wvmheyrle RWR92811.1 102 KTVGMKKTLIFHLGRAPRGDRTNWVMHEYRLE 133 9***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MARDSLPPGF RFHPTDVELV MYYLKKKVMG KLGFEGISEI ELYKFSPWDL PEKSCLKSRD 60 LEWYFFCPRD RKYSNGPRAN RATDIGYWKT TGKDRSVCHN SKTVGMKKTL IFHLGRAPRG 120 DRTNWVMHEY RLEDQALVDR GISQDAYVLC KIFEKSGPGP KNGEQHGAPF REEEWDDDDN 180 VESITFYNPS FPPRPVDCQN LAVVESAVDI NSESDAHGGS SPECSEALMV NDGQPELINI 240 DEFLAELEVG ASVSDGNAVE KPDQIIPRTC DNVQNASLPN GGDENNLAYD LDRMISDLIN 300 GNIILENDLP PPPVHAGPIQ KAEEMGHEYV QQSSSGGEQH TVHSTLEHLS SGDGSYSKFQ 360 YLLDSYPAPP ASAAEYSPLK GEDPKCNLVS YSSPIHVKAE VTLKCMCTGS LLSDRLGPHP 420 CICCCGGKPS KKLGREPSSH GGGFMLVFLL GMFSALMWVF LFAMGAKFGR YAWKNFIQPS

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MARDSLPPGF RFHPTDVELV MYYLKKKVMG KLGFEGISEI ELYKFSPWDL PEKSCLKSRD  60
LEWYFFCPRD RKYSNGPRAN RATDIGYWKT TGKDRSVCHN SKTVGMKKTL IFHLGRAPRG  120
DRTNWVMHEY RLEDQALVDR GISQDAYVLC KIFEKSGPGP KNGEQHGAPF REEEWDDDDN  180
VESITFYNPS FPPRPVDCQN LAVVESAVDI NSESDAHGGS SPECSEALMV NDGQPELINI  240
DEFLAELEVG ASVSDGNAVE KPDQIIPRTC DNVQNASLPN GGDENNLAYD LDRMISDLIN  300
GNIILENDLP PPPVHAGPIQ KAEEMGHEYV QQSSSGGEQH TVHSTLEHLS SGDGSYSKFQ  360
YLLDSYPAPP ASAAEYSPLK GEDPKCNLVS YSSPIHVKAE VTLKCMCTGS LLSDRLGPHP  420
CICCCGGKPS KKLGREPSSH GGGFMLVFLL GMFSALMWVF LFAMGAKFGR YAWKNFIQPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	4e-82	NAC family protein