PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR92792.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 253aa MW: 28883.7 Da PI: 6.3642 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 123.2 | 2.2e-38 | 68 | 185 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrF Ptdeel+ ++L +k+++++++ ++i+++d+ ++Pw+L+ k+ +++++wyfF + +nr+ ++gyWk g d+++ls ++++ RWR92792.1 68 LPPGFRFYPTDEELILHFLYRKAAHQPCHP-NTIPDLDLDCYDPWELNGKALEGDNKWYFFNHV--------TQNRVSTNGYWKVLGVDEPILS-GSRT 156 79*************************999.78**************97777889******986........46899999**************.99** PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vglkk Lvfy g+ap+g kt+Wvmhe++l RWR92792.1 157 VGLKKCLVFYIGEAPEGIKTNWVMHEFHL 185 ***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MKASSDHLQS HVNLFFVLFI PSLYKYKTHH TNIHTKKIKT TYTHLSLSLS LSLSLSLFKD 60 MGEDNINLPP GFRFYPTDEE LILHFLYRKA AHQPCHPNTI PDLDLDCYDP WELNGKALEG 120 DNKWYFFNHV TQNRVSTNGY WKVLGVDEPI LSGSRTVGLK KCLVFYIGEA PEGIKTNWVM 180 HEFHLLDCGS TGSSRSSRRK GKPRMVSNEW VLCRVSETNC SSQGSCCDEE SELSCLDEVF 240 LSLDDLDEIS LPN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64530.1 | 3e-65 | NAC family protein |