PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR92771.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 209aa MW: 24299.8 Da PI: 8.1026 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.1 | 2.3e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvt+skRrng+lKKA+E+ vLCda+v+++ifs tgk+ ey+s RWR92771.1 9 KRIENSTNRQVTYSKRRNGLLKKAKEITVLCDADVSLVIFSATGKMSEYCS 59 79***********************************************96 PP | |||||||
2 | K-box | 81.3 | 2.2e-27 | 71 | 163 | 1 | 97 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 yqk+sg++l++ak+e+l+ e++++kke++++q e+Rhl+GedL+sL keL ++e++Le++l+ +R+k++ell l+k e+ l+een++L+ + RWR92771.1 71 YQKASGNRLWDAKHEYLSMEVDRIKKENDSMQIELRHLKGEDLTSLHPKELIHIEEALENGLTGVRDKQEELLS----ILKKNERILEEENMRLTYM 163 899*********************************************************************96....5777777777777777644 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MGRGKIEIKR IENSTNRQVT YSKRRNGLLK KAKEITVLCD ADVSLVIFSA TGKMSEYCSS 60 STTLIKMLDR YQKASGNRLW DAKHEYLSME VDRIKKENDS MQIELRHLKG EDLTSLHPKE 120 LIHIEEALEN GLTGVRDKQE ELLSILKKNE RILEEENMRL TYMLHHHHLA IDGNVRDVEQ 180 GYQQKESECS SQMQFAFRVQ PIQPNLQNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 8e-85 | MIKC_MADS family protein |