PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR92748.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 310aa MW: 35843.4 Da PI: 5.8855 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 167.6 | 4.2e-52 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelv++yL++k++++++ + +i+e+d+yk++Pw Lp + +ekewyfFs+rd+ky++g+r+nra+ sgyWkatg dk++ + + + RWR92748.1 6 LPPGFRFHPTDEELVTHYLCRKCASQSIAV-PIIAEIDLYKFDPWLLPGLALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIRPNgSPK 103 79*************************999.88***************6555679**************************************975566 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 vg+kk Lvfy+g+apkgekt+W+mheyrl RWR92748.1 104 PVGIKKALVFYTGKAPKGEKTNWIMHEYRL 133 7***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence |
MGDLELPPGF RFHPTDEELV THYLCRKCAS QSIAVPIIAE IDLYKFDPWL LPGLALYGEK 60 EWYFFSPRDR KYPNGSRPNR AAGSGYWKAT GADKPIRPNG SPKPVGIKKA LVFYTGKAPK 120 GEKTNWIMHE YRLADVDRSA RKKNSLRLDD WVLCRIYNKK GSVESKQQRP KNLPENEMEE 180 EVEDQEQDQK PEILTQAHHQ PMTPPVLNDF PYFDSSESMP HLQPTDSSCS EHVISSDFTC 240 DREVQSEPRW NTNWQSTLQI PNINMDVIRP IDDNTNTNHN PFLSQLDGLQ LSPMFRDPYQ 300 DVLMYLQKPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-125 | NAC family protein |