PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR92679.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 213aa MW: 24540.5 Da PI: 6.9169 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 75.5 | 4e-24 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien +qv+f+kRr g+lKKA+ELS+LCda++ +iifs++gklye + RWR92679.1 9 KRIENPVHQQVSFCKRRGGLLKKAKELSILCDADIGIIIFSKHGKLYELA 58 79*********************************************965 PP | |||||||
2 | K-box | 44.8 | 5.2e-16 | 82 | 169 | 10 | 97 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 e++k+ +l+qe++ Lk+ei++Lq R + G+ e+ +l eL+ +e+ Le+ ++ +R+ K++ ++++i+ l++k ++l+ +n+ L+ k RWR92679.1 82 EAHKSLELKQEVDVLKQEIQMLQMGFRCMFGNRSEKETLDELHGMERYLENRIRLVRTEKMQNMFQEIQLLRNKDEMLEAANEFLQGK 169 45566789****************************************************************************9977 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MVRGKRQMKR IENPVHQQVS FCKRRGGLLK KAKELSILCD ADIGIIIFSK HGKLYELATK 60 GTMQGMMERY KETWCAAEAE EEAHKSLELK QEVDVLKQEI QMLQMGFRCM FGNRSEKETL 120 DELHGMERYL ENRIRLVRTE KMQNMFQEIQ LLRNKDEMLE AANEFLQGKA LEQNLIFNMP 180 PATAGNGVFD GTPVLTGPPS PLIIQNECFE PMT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71692.1 | 4e-51 | MIKC_MADS family protein |