PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR92620.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TCP

Protein Properties

Length: 321aa MW: 34118 Da PI: 10.3777

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR92620.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	119.8	3.3e-37	120	194	2	79
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesss 79 a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++a+++ s s RWR92620.1 120 AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPATFS---SLS 194 78**************************************************************99999666...222 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MCHSRLSPPA TAAQSLDPLP PSLFHLTFSL HPLHRNINRY HHRHLLLLLL LLLLCGLYTH 60 TSQVTTSSSS AAAAVVVVVW LLLQEFSMSN GEAPSNGAIT VTEPQRQLQL HSSSTSTALA 120 VKKPPSKDRH SKVDGRGRRI RMPIICAARV FQLTRELGHK SDGQTIEWLL RQAEPSIIAA 180 TGTGTTPATF SSLSVAVRGG SGPSSIASLD QKPSLSPAPF FLGKRFRDDD GGAREDSGIG 240 VGIGGPAAGF WAVPARPDFG QLWSFASPEL VVPPSVPPAR FVPEASAARV GNYLPLAQGH 300 LNLLAALSGA PAGGRREDEP R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	2e-59	TCP family protein