PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR92613.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | TCP | ||||||||
Protein Properties | Length: 321aa MW: 34118 Da PI: 10.3777 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 119.8 | 3.3e-37 | 120 | 194 | 2 | 79 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesss 79 a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++a+++ s s RWR92613.1 120 AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPATFS---SLS 194 78**************************************************************99999666...222 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 321 aa Download sequence |
MCHSRLSPPA TAAQSLDPLP PSLFHLTFSL HPLHRNINRY HHRHLLLLLL LLLLCGLYTH 60 TSQVTTSSSS AAAAVVVVVW LLLQEFSMSN GEAPSNGAIT VTEPQRQLQL HSSSTSTALA 120 VKKPPSKDRH SKVDGRGRRI RMPIICAARV FQLTRELGHK SDGQTIEWLL RQAEPSIIAA 180 TGTGTTPATF SSLSVAVRGG SGPSSIASLD QKPSLSPAPF FLGKRFRDDD GGAREDSGIG 240 VGIGGPAAGF WAVPARPDFG QLWSFASPEL VVPPSVPPAR FVPEASAARV GNYLPLAQGH 300 LNLLAALSGA PAGGRREDEP R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G23280.1 | 2e-59 | TCP family protein |