PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR92591.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 339aa    MW: 36801.4 Da    PI: 5.9787
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR92591.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.62.9e-052322691254
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 R +++ +++  L++l+ +      +K + a++L  A+eYIk L
  RWR92591.1 232 RKEKLGDRITALQQLVSPF-----GKTDTASVLFDAIEYIKFL 269
                 677888999*******998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MGEEMQRSIY RGDWTSETSH LIGWSSDISL ATQINDDAAT ACDDSMEFSE PKQIYSQLQF  60
SELGVPSSIW GQDLLSSRSG IGLRCDNPFT APAINNMLKQ EHPFPNLESD SLVGDSPFLT  120
QKVSAMPPLF PAMVGEGTCL SSGSKAPRMG GINNQCLVYG EDSPSSWKGS QETAGTPRSS  180
GVLSSKKGQE RSTACNAALK DSCMDMKKST EESTPKRIRS DSHVPFTTFK VRKEKLGDRI  240
TALQQLVSPF GKTDTASVLF DAIEYIKFLH DQVTVLSTPY MMLSHKLSGT NLDVEAAKEK  300
GGGGLRSRGL CLVPVSTTLH VAKDNTTDFW APTFGGSFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.15e-38bHLH family protein