PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR92574.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

HSF

Protein Properties

Length: 345aa MW: 38414.4 Da PI: 7.9379

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR92574.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.5	3.3e-36	25	117	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d+++++++sw e+ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ Fkkg+k+ll++i+ RWR92574.1 25 FLTKTYQLVDDPSTDHIVSWGEDDSTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEFFKKGEKHLLCEIH 112 9***************************************************************99.........**************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k++ RWR92574.1 113 RRKTS 117 987 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MALMLDNCEG ILLSLDSHKS VPAPFLTKTY QLVDDPSTDH IVSWGEDDST FVVWRPPEFA 60 RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KKGEKHLLCE IHRRKTSQPQ 120 VSMNHHHTSM GGSTTPGFFP FPGRASISPS DSDEQANWYE SSPLSSPRAP PACGSASALS 180 EDNERLRRSN SMLLSELAHM RKLYNDIIYF VQNHVRPVAP SNSFPSSLMI CNTSAPAIAA 240 NTCPSLVQKP LHQLLGLHQS LPKQAHVNGS LNSSSTSSSS LTMFEEPPND GNNSSRPKLF 300 GVPLHSNKRL HPEPPSPSME PNSRKARLVL AKEDLGLNLM PPSPC

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MALMLDNCEG ILLSLDSHKS VPAPFLTKTY QLVDDPSTDH IVSWGEDDST FVVWRPPEFA  60
RDLLPNYFKH NNFSSFVRQL NTYGFRKIVP DRWEFANEFF KKGEKHLLCE IHRRKTSQPQ  120
VSMNHHHTSM GGSTTPGFFP FPGRASISPS DSDEQANWYE SSPLSSPRAP PACGSASALS  180
EDNERLRRSN SMLLSELAHM RKLYNDIIYF VQNHVRPVAP SNSFPSSLMI CNTSAPAIAA  240
NTCPSLVQKP LHQLLGLHQS LPKQAHVNGS LNSSSTSSSS LTMFEEPPND GNNSSRPKLF  300
GVPLHSNKRL HPEPPSPSME PNSRKARLVL AKEDLGLNLM PPSPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	1e-104	HSF family protein