PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR92501.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | bHLH | ||||||||
Protein Properties | Length: 237aa MW: 25591.9 Da PI: 8.878 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.4 | 3e-14 | 46 | 93 | 2 | 54 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +++h+e+ErrRR+riN +++Lr+llP+ +K +Ka+ L ++v+++++L RWR92501.1 46 CKSHSEAERRRRERINGHLATLRSLLPNT-----TKTDKASLLAEVVHHVREL 93 789*************************9.....8***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MLPFQGYYGF GREQGLLQGL GLVEMDGEDS NLKSRSAAEM KQVAACKSHS EAERRRRERI 60 NGHLATLRSL LPNTTKTDKA SLLAEVVHHV RELKRHAADM TISDPTSGGG IWPFPGETDE 120 VTLDQDRQSS LIKASVCCDD RPELLSDLNV AIRSLRLRAV KAEMATLGGR TKSVFLIEGG 180 GGEEDLSSIR RALKAVIEKP AGGGGGGGGS SSASGSMVPE NKRLRFSRQL NLHHGFQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 53 | 58 | ERRRRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G25710.1 | 6e-41 | bHLH family protein |