PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR91988.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 193aa MW: 22137.8 Da PI: 10.0172 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.5 | 2.1e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr g+lKKA+ELSvLCdaeva+iifsstgkl+e+ss RWR91988.1 9 KRIENATSRQVTFSKRRVGLLKKAQELSVLCDAEVALIIFSSTGKLFEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 70.4 | 5.7e-24 | 87 | 172 | 15 | 100 |
K-box 15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ +e++ Lk+ei +Lq + +++G++L+ LslkeLq+Le+qL +++ +++++K++llleq+e+++ +e+++ en++Lrk+++e RWR91988.1 87 KRQAKEVNILKDEITKLQIAHLQMMGKELTGLSLKELQHLEHQLTEGILSVKDRKEQLLLEQLEKSRVQERRTIVENESLRKQVDE 172 56679******************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MGRGKIEIKR IENATSRQVT FSKRRVGLLK KAQELSVLCD AEVALIIFSS TGKLFEFSSA 60 GMKRTLSRYS KCVDGFEPSL VKYEVEKRQA KEVNILKDEI TKLQIAHLQM MGKELTGLSL 120 KELQHLEHQL TEGILSVKDR KEQLLLEQLE KSRVQERRTI VENESLRKQV DELRGILPST 180 EQPMPPYVRI STL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13790.1 | 2e-67 | MIKC_MADS family protein |