PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR91911.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 211aa MW: 24395.9 Da PI: 10.2977 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.1 | 4.7e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvt+skRr gilKKA+E+ +LCdaev++++fsstgk+ eyss RWR91911.1 9 KRIENSTNRQVTYSKRRGGILKKAKEITILCDAEVSLVVFSSTGKMSEYSS 59 79***********************************************96 PP | |||||||
2 | K-box | 81.9 | 1.5e-27 | 71 | 165 | 1 | 95 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 yqk+sgk+l++ak+e l++e++++kke++++q ++Rhl+GedL+sL keL +e++L+++l ++R++++e+l++ ++ ++ e+e+++ L+ RWR91911.1 71 YQKASGKKLWDAKHEFLSNEVERIKKENDSMQIKLRHLKGEDLTSLHPKELIPIEEALDNGLANVRARQMEFLRTLKKNERNLEDENKRLSYILH 165 899*********************************************************************97655555555555555555555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MGRGKIEIKR IENSTNRQVT YSKRRGGILK KAKEITILCD AEVSLVVFSS TGKMSEYSSP 60 STTLVKILDR YQKASGKKLW DAKHEFLSNE VERIKKENDS MQIKLRHLKG EDLTSLHPKE 120 LIPIEEALDN GLANVRARQM EFLRTLKKNE RNLEDENKRL SYILHQQQIS MGGNVREADH 180 HGYLQKGRDY PSQIPFAFRV QPIQPNLHQN K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G20240.1 | 2e-83 | MIKC_MADS family protein |