PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR91662.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | LBD | ||||||||
Protein Properties | Length: 234aa MW: 25659.8 Da PI: 6.3324 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 124.9 | 4.1e-39 | 7 | 107 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+lrrkC+k+Cv+apyf++eq + +fa++hk+FGasnv+kll++lp ++r +a+ ++ yeA+ar++dP+yG+v++i++l+qq+ +l+a+la+lk RWR91662.1 7 PCGACKFLRRKCVKGCVFAPYFCHEQgATHFAAIHKVFGASNVSKLLAHLPVSDRLEAAVTISYEAQARLQDPIYGCVSHIFALRQQVVNLQAQLASLK 105 7*************************89********************************************************************999 PP DUF260 99 ee 100 ++ RWR91662.1 106 AQ 107 87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MTGFGSPCGA CKFLRRKCVK GCVFAPYFCH EQGATHFAAI HKVFGASNVS KLLAHLPVSD 60 RLEAAVTISY EAQARLQDPI YGCVSHIFAL RQQVVNLQAQ LASLKAQAAQ NLAANGSMSS 120 SPPQDKFHDR LPSFQQECNG FFNLESLVPG QASFSGNPES IESMLCYGNG LIDPNSAGEY 180 HHSSMTEERT SYEGSGSSLY PMATLDMQMD SRKWDFQDME DLQSVAFANY LHHS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42440.1 | 1e-58 | LBD family protein |