PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR91513.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 312aa MW: 35348.2 Da PI: 8.794

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR91513.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.6	3.4e-55	10	137	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeel+++yL +k+++ k++ ++i++vd++k+ePwdLp k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++++ ++e RWR91513.1 10 LPPGFRFHPTDEELITFYLIHKLSDPKFTG-RAIADVDLNKCEPWDLPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNAGYWKTTGKDKEIFNStTSE 107 79***********************999.89***********99999************************************987888 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 lvg+kktLvfykgrap+gekt+Wvmheyr RWR91513.1 108 LVGMKKTLVFYKGRAPRGEKTNWVMHEYRS 137 9*************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MDGPDKDETL PPGFRFHPTD EELITFYLIH KLSDPKFTGR AIADVDLNKC EPWDLPGKAK 60 MGEKEWYFFS LRDRKYPTGV RTNRATNAGY WKTTGKDKEI FNSTTSELVG MKKTLVFYKG 120 RAPRGEKTNW VMHEYRSQSK SSFKTKDEWV VCRVFQKSST VKKYPSNQPR PHPFNLDVGS 180 NILPSMMQPE FCHYGNGRNY MSNADLAELS RVMRGPPSMT LPMQPQVNFP GSFTVSGLNL 240 NIGAPTGPPV LRTAPIMLSP QPTATTDTHP QMLAGGMLPA DNGLCSDMPP NENNRFQHME 300 PYVDFDGYWP SY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	1e-104	NAC family protein