PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWR91484.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 117aa MW: 13537.8 Da PI: 10.3793 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 127.6 | 5.7e-40 | 6 | 100 | 1 | 95 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrr+C++dC+++pyfp+++p++fa+vhk++Gasnv+k+l+++p + r +a++sl++eA++r++dP+yG+vg+i++lq+++ +++ e+ RWR91484.1 6 RCAACKFLRRRCPEDCIFSPYFPSTNPQRFACVHKIYGASNVSKMLQQIPVHLRANAADSLFFEAHMRIQDPIYGCVGIISRLQHEIYSSQREML 100 6****************************************************************************************999875 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 117 aa Download sequence |
MSSHSRCAAC KFLRRRCPED CIFSPYFPST NPQRFACVHK IYGASNVSKM LQQIPVHLRA 60 NAADSLFFEA HMRIQDPIYG CVGIISRLQH EIYSSQREML LRPRSLSTQP NRPKKLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G26660.1 | 1e-46 | LBD family protein |