PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR91314.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family Trihelix
Protein Properties Length: 312aa    MW: 36931.6 Da    PI: 8.4828
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR91314.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix71.51.5e-2285164286
    trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 Wt+ e+ +Li++r++me r+ r+ +k  lW+e+s+ +r +g+ r p+qC++kwe+l   yk+++eg +++     + +p+f++l+
  RWR91314.1  85 WTRIETTKLIRIRSDMEPRFCRAGRKSDLWDEISDLLRTEGVCRDPQQCRDKWEKLTAAYKEVREGIRDK-----EDFPFFSDLD 164
                 ********************************************************************84.....5689**9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MNGREKRQEP ALAMICLSAK QEPPDQGRNT PPETHPPAEF PSRSSPTAID ARPLQSVPPK  60
PHSNGNVVEE EKKREREHKK RSKNWTRIET TKLIRIRSDM EPRFCRAGRK SDLWDEISDL  120
LRTEGVCRDP QQCRDKWEKL TAAYKEVREG IRDKEDFPFF SDLDPILSGK PHRRESLPPH  180
HPPPQQDDTA SDDDTEDAAP RKRRSRLPDG DRAVEVLKEL MESAMAQQQR FMADLVEAME  240
RRERFREKIR QEREERWREE DREQRLAFEN AILVLAKRIG RDEEREEEKV KEKEKKKKRD  300
RGIGREEKWC YL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63420.16e-13Trihelix family protein