PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR91158.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

WRKY

Protein Properties

Length: 412aa MW: 44404.4 Da PI: 7.5859

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR91158.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.7	1.6e-30	221	277	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 DgynWrKYGqK+vk+se +rsYYrCt+a+C +kkkver++ d+++ ei+Y+g+Hnhe RWR91158.1 221 TDGYNWRKYGQKQVKSSESSRSYYRCTHANCVAKKKVERCH-DGQIAEIIYKGHHNHE 277 6**************************************.*************8 PP
2	WRKY	32	2.5e-10	393	412	3	22
-SS-EEEEEEE--TT-SS-E CS WRKY 3 DgynWrKYGqKevkgsefpr 22 Dgy+WrKYGqK vkg+++pr RWR91158.1 393 DGYRWRKYGQKIVKGNPNPR 412 9******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MAEARSSSSS PKPIKREKQG DEEEEEKSKI LPPISIPDRS SAEALFKANS GRGSSETLTL 60 AEQDHDCRSF SQLLAGAMAS PASAAGNSPT AAVLEMKPTL VLTLAVDPAR FPLVAQPAFI 120 GVLAQGQFGM SHQEALASVT AQAHAHAQAQ MQLQTGYPSP SLAIPSKSLT QPILSALSPT 180 PLQQRMPLVP EDNVSMADVE QHTSSDQKAQ SAHGNVKTPS TDGYNWRKYG QKQVKSSESS 240 RSYYRCTHAN CVAKKKVERC HDGQIAEIIY KGHHNHEPPQ KIRCKKEGEA PSGGPSGGNE 300 TGDIPGENLS ESNPSISRTE QTSCHTTPEL QLQCSSNCDG DANTRSDEER GDEPDPKRRI 360 KDNTVSHSAP LLKTVKEPKV VVQTGGDPGN FGDGYRWRKY GQKIVKGNPN PR

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MAEARSSSSS PKPIKREKQG DEEEEEKSKI LPPISIPDRS SAEALFKANS GRGSSETLTL  60
AEQDHDCRSF SQLLAGAMAS PASAAGNSPT AAVLEMKPTL VLTLAVDPAR FPLVAQPAFI  120
GVLAQGQFGM SHQEALASVT AQAHAHAQAQ MQLQTGYPSP SLAIPSKSLT QPILSALSPT  180
PLQQRMPLVP EDNVSMADVE QHTSSDQKAQ SAHGNVKTPS TDGYNWRKYG QKQVKSSESS  240
RSYYRCTHAN CVAKKKVERC HDGQIAEIIY KGHHNHEPPQ KIRCKKEGEA PSGGPSGGNE  300
TGDIPGENLS ESNPSISRTE QTSCHTTPEL QLQCSSNCDG DANTRSDEER GDEPDPKRRI  360
KDNTVSHSAP LLKTVKEPKV VVQTGGDPGN FGDGYRWRKY GQKIVKGNPN PR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	7e-53	WRKY family protein