PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR91099.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family C2H2
Protein Properties Length: 272aa    MW: 30215.8 Da    PI: 7.7561
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR91099.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.00022100122123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C++C + F ++  L  H++ H
  RWR91099.1 100 FSCNYCQRKFYSSQALGGHQNAH 122
                 89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MEENWQERSF SETSSISASK ESPSSQENGE QKDNDRHEAR LAEHDLFLDL SLCNKIEDRE  60
CAPELNLIDL LNLNPSQQAS SSKSQRRKEG VGEGVEPRVF SCNYCQRKFY SSQALGGHQN  120
AHKRERTLAK RGRLDVDSHY PSNLYSSMAS LPLHGSLHGS FNRSLGIQVH SMIHKPCLSS  180
ISGVPYGHHR WSRPPMDQQP AIGRLSMEDC LTSCRTKIGV CSKGGAARFD GGCRMLSTSI  240
SSEGSISDLC QTGIHMKSHQ GEQQKLDLSL KL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25160.11e-36C2H2 family protein