PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR90718.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 417aa MW: 46343.3 Da PI: 9.0348

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR90718.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.7	5.6e-54	85	212	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelvv+yLkkk+++++l++ ++i+evd+yk++Pw+Lp k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l++ +++ RWR90718.1 85 LPPGFRFHPTDEELVVHYLKKKANSSPLPV-TIIAEVDLYKFDPWELPGKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSrGNQ 182 79**************************.89***********8888999*********************************9986778 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg+kk Lvfy gr pkg kt+W+mheyrl RWR90718.1 183 KVGVKKALVFYGGRPPKGIKTNWIMHEYRL 212 8*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MTSKGTGQPT DTPNAILHLP LFVALCPLWS PPSCHPRGSL SFVSESHASR LCWSAFVIPA 60 RILNHWILEF MDSTDSSSGP RQPHLPPGFR FHPTDEELVV HYLKKKANSS PLPVTIIAEV 120 DLYKFDPWEL PGKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPILTSRG 180 NQKVGVKKAL VFYGGRPPKG IKTNWIMHEY RLVDNNTTKP PSLDAASKKN SLRLDDWVLC 240 RIYKKNISNR PMETDKDDSM DDMLASVAPS INGYQNPKPQ AQRHTNFSAL LDNDEIFFDG 300 LLNDDGMNGN PMPKFASSTT NTESDLPMVS ATGTLPLKRT LNSLYWNDTG PMGSPSKRLH 360 SSDNDSMGGA RSNGSNSMAL LLNQLPQGAP FHQNSFLGSI NDGVLRQQNQ LLGLNWN

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MTSKGTGQPT DTPNAILHLP LFVALCPLWS PPSCHPRGSL SFVSESHASR LCWSAFVIPA  60
RILNHWILEF MDSTDSSSGP RQPHLPPGFR FHPTDEELVV HYLKKKANSS PLPVTIIAEV  120
DLYKFDPWEL PGKATFGEQE WYFFSPRDRK YPNGARPNRA ATSGYWKATG TDKPILTSRG  180
NQKVGVKKAL VFYGGRPPKG IKTNWIMHEY RLVDNNTTKP PSLDAASKKN SLRLDDWVLC  240
RIYKKNISNR PMETDKDDSM DDMLASVAPS INGYQNPKPQ AQRHTNFSAL LDNDEIFFDG  300
LLNDDGMNGN PMPKFASSTT NTESDLPMVS ATGTLPLKRT LNSLYWNDTG PMGSPSKRLH  360
SSDNDSMGGA RSNGSNSMAL LLNQLPQGAP FHQNSFLGSI NDGVLRQQNQ LLGLNWN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-108	NAC family protein