PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR90584.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

Nin-like

Protein Properties

Length: 1030aa MW: 114131 Da PI: 6.8369

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR90584.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	74	1.9e-23	645	754	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLg...........................................................vclTvLKriCRqyGI 41 ek+isl++l++yF++++kdAAk++g vc+T+LKriCR++GI RWR90584.1 645 EKSISLQVLRQYFAGSLKDAAKSIGgnpcfnvsnvyeketrvlmnvtekfrdllkrtpnqdwelfllaipkhiwhdvnyslhryVCPTTLKRICRKHGI 743 799********************************************************************************************** PP RWP-RK 42 kRWPhRkiksl 52 RWP+Rkik++ RWR90584.1 744 TRWPSRKIKKV 754 *******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1030 aa Download sequence
MGDAVSPPGA ILGAISDTSL DIDLMDDLLL GGCWLETVQS HDLFQLGTST SAALLNSSCF 60 SLSDINISGS NPNPPQSTAQ EDLVTSVLPG NPPSVEAQTE ILIGTQYLSQ NTIETAECTS 120 QLESYPATGG RSLDEFEKVS LSSDVSQRRW IEPGANLGPT SSVKERLKQA LGYIKEFTKD 180 SDVLVQIWVP VNRGGRHVLT TQDQPFSLDT SCQKLVNYRT VSMNYEFPAD ENSNEAVGLP 240 GRVFLGRLPE WTPDVRYFSS YEYPRINYAQ QIDVRGALAL PVFERGSRVC LGVVEVVMTK 300 AKIKYHSELE SICSALQAVN LRSSEVVTVP RLKVSNNSYQ VVLPEILEVL RAVCESHRLP 360 LAQTWVPCIQ QGKKGSRHSE ENYAVCVSTV DDACYVADPH ICGFHEACSE HHLVKGQGVV 420 GKAFTTNQPC FSEDITAFSL TQYPLSHYAR MFGLRAAVAI RLRSFYTGTA DYVLEFFLPI 480 ECLDSEEQKM MLSLLSMILQ QACQSLRVVT DKELEDESVL QINQVVPSVG VLTTSFSGDD 540 GRQNQEKNPT KGQRPNSVQA QQKGKTPMVS TMPLECQKKA TDGFNVSTHW DCPEGTMGAG 600 EIYPELKLHY QDSVKDSVRH GDSSFSELSI SNAGKVTSKR RTKIEKSISL QVLRQYFAGS 660 LKDAAKSIGG NPCFNVSNVY EKETRVLMNV TEKFRDLLKR TPNQDWELFL LAIPKHIWHD 720 VNYSLHRYVC PTTLKRICRK HGITRWPSRK IKKVGHSLKK LQVVIDSVQG VGRDFHISSF 780 YENFPHISGS NLTSPKLSGR STSSGLKQPT GPPASSNMHP EDVLGIRTAP TRSPSSTCSQ 840 SSNSSLCCST GVPQHSHACQ VVASEDTSMV EKESAVLKKA YSEAELLAFT KDEQKPPARS 900 LSHISLSEHP SLDRSLSPLS KASCHMPTDG SSFKVKVMYR DDKVRFRMQP SWRFQDLQQE 960 IAKRFNIDDV STFDLKYLDD DSEWVLLTCD DDLQECRDIY KSACAHAVKL SVHHIVHPTP 1020 KNSLGSSGPR

Sequence ? help Back to Top

Protein Sequence Length: 1030 aa Download sequence

MGDAVSPPGA ILGAISDTSL DIDLMDDLLL GGCWLETVQS HDLFQLGTST SAALLNSSCF  60
SLSDINISGS NPNPPQSTAQ EDLVTSVLPG NPPSVEAQTE ILIGTQYLSQ NTIETAECTS  120
QLESYPATGG RSLDEFEKVS LSSDVSQRRW IEPGANLGPT SSVKERLKQA LGYIKEFTKD  180
SDVLVQIWVP VNRGGRHVLT TQDQPFSLDT SCQKLVNYRT VSMNYEFPAD ENSNEAVGLP  240
GRVFLGRLPE WTPDVRYFSS YEYPRINYAQ QIDVRGALAL PVFERGSRVC LGVVEVVMTK  300
AKIKYHSELE SICSALQAVN LRSSEVVTVP RLKVSNNSYQ VVLPEILEVL RAVCESHRLP  360
LAQTWVPCIQ QGKKGSRHSE ENYAVCVSTV DDACYVADPH ICGFHEACSE HHLVKGQGVV  420
GKAFTTNQPC FSEDITAFSL TQYPLSHYAR MFGLRAAVAI RLRSFYTGTA DYVLEFFLPI  480
ECLDSEEQKM MLSLLSMILQ QACQSLRVVT DKELEDESVL QINQVVPSVG VLTTSFSGDD  540
GRQNQEKNPT KGQRPNSVQA QQKGKTPMVS TMPLECQKKA TDGFNVSTHW DCPEGTMGAG  600
EIYPELKLHY QDSVKDSVRH GDSSFSELSI SNAGKVTSKR RTKIEKSISL QVLRQYFAGS  660
LKDAAKSIGG NPCFNVSNVY EKETRVLMNV TEKFRDLLKR TPNQDWELFL LAIPKHIWHD  720
VNYSLHRYVC PTTLKRICRK HGITRWPSRK IKKVGHSLKK LQVVIDSVQG VGRDFHISSF  780
YENFPHISGS NLTSPKLSGR STSSGLKQPT GPPASSNMHP EDVLGIRTAP TRSPSSTCSQ  840
SSNSSLCCST GVPQHSHACQ VVASEDTSMV EKESAVLKKA YSEAELLAFT KDEQKPPARS  900
LSHISLSEHP SLDRSLSPLS KASCHMPTDG SSFKVKVMYR DDKVRFRMQP SWRFQDLQQE  960
IAKRFNIDDV STFDLKYLDD DSEWVLLTCD DDLQECRDIY KSACAHAVKL SVHHIVHPTP  1020
KNSLGSSGPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein