PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR90554.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | NAC | ||||||||
Protein Properties | Length: 430aa MW: 49864.7 Da PI: 4.3133 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 137.9 | 6.4e-43 | 42 | 167 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 p G+rF+P+deel+ yLk+k+++ +l++ ++ikev++yk++P+dL + v+++e+++yfF+++ +kya+g+r+nrat++gyWka+ d +++++++++ RWR90554.1 42 PCGYRFRPRDEELL-VYLKRKIHRLPLPC-DIIKEVELYKYDPSDLLgQFVSKGEEKCYFFTPTYRKYAKGSRPNRATNNGYWKASTADIQIKDEEDND 138 89************.8*************.99**************856777788899***************************************** PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +g+k+tLvfy+g++p+g+kt+W+mhey+l RWR90554.1 139 IGTKRTLVFYSGEHPHGRKTNWIMHEYKL 167 ***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 430 aa Download sequence |
MRNSIPPKIY FSALGIKGSL STEEEEREIS CAATRSTSMM VPCGYRFRPR DEELLVYLKR 60 KIHRLPLPCD IIKEVELYKY DPSDLLGQFV SKGEEKCYFF TPTYRKYAKG SRPNRATNNG 120 YWKASTADIQ IKDEEDNDIG TKRTLVFYSG EHPHGRKTNW IMHEYKLMEY LNTSTNVQTP 180 IDPMKLDEWV LCSIYENLNG DKREKMKRKA SEELDTRTEK RAFVVQEPQS QINEHKANDQ 240 CVVSSYDIHK KEPIHDASDM GWDIGLMSDS DFAKLMEMTA TEEVGTKREE RTVVVQQEQP 300 QIEYGDNDQS VVVFSADYLE DIINWDVPPI SDSYYADLAE LTEVMTGEEL DTRSEINVVQ 360 DNDQSVFFSY DDLQKLPILD ASDMEGWDDI PPIPMSDSDF DDFEEFMEMM PGEELDRRSE 420 ITNGRVLRED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61110.1 | 6e-46 | NAC family protein |