PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR90518.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 680aa MW: 78478.2 Da PI: 5.7325

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR90518.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	182.6	9.8e-57	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhPtdeelv +yLk+k++g+++el e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nrat++gyWkatgkd++v s ++ RWR90518.1 6 LPPGFRFHPTDEELVAYYLKRKINGRTIEL-EIIPEVDLYKCEPWDLPeKsFLPSKDLEWYFFSPRDRKYPNGSRTNRATQAGYWKATGKDRKVNS-QK 102 79**************************.99**********95334455777**********************************.89 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++vg+kktLv+y+grap+g++tdWvmheyrl RWR90518.1 103 REVGMKKTLVYYRGRAPHGRRTDWVMHEYRL 133 99*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 680 aa Download sequence
MAPVSLPPGF RFHPTDEELV AYYLKRKING RTIELEIIPE VDLYKCEPWD LPEKSFLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATQAGYWK ATGKDRKVNS QKREVGMKKT LVYYRGRAPH 120 GRRTDWVMHE YRLDESECEI PSGLQDAYAL CRIFKKNGTG LKITEQYGAS FDDHSHWTPN 180 DQSSTLELSS EGRGEDLEST CYRFQSETGS SDIIQEVEFD ASAQREGKWM HPLADEALST 240 EPPFQNHRSS AHIPSKVDIA LECARLQQQR LLPPLMEDFP QFDLTDSRFL NPGREDMKET 300 DILQEILSVA CASQELMNQS SYQNTWTYNH PLLDEFTPLM ELDIQGRNEE AQHHLINDIG 360 SSRFVEISDL EEEFKGQRVV ENLRGIKMSH KDLDEITLEE HKTVLIESIS NFQREDPDNK 420 GGINEHGTFK GFSDNETKPN SSEFLSNDFT IAFRNDNPDG IFHENGDDND FASTPTFHVY 480 EKVEVSRGLY VSSCNSAKTF FHRVEPSKTV RVHMNTMVTH ERAVPKSEIL RKNQHRGSVF 540 SKFKLFARDK FMWIKTSVKP WKGSSMINET ITSNISIVAL LLTCCIYLGE EHEGVRSELP 600 SNDKALIDEK EDSYYEEVKE MKELKRMEGS AKKKIGLFTN IRGTSISNTF LNWKWTFLFL 660 TVSLALYAFV INKYLLQLKP

Sequence ? help Back to Top

Protein Sequence Length: 680 aa Download sequence

MAPVSLPPGF RFHPTDEELV AYYLKRKING RTIELEIIPE VDLYKCEPWD LPEKSFLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATQAGYWK ATGKDRKVNS QKREVGMKKT LVYYRGRAPH  120
GRRTDWVMHE YRLDESECEI PSGLQDAYAL CRIFKKNGTG LKITEQYGAS FDDHSHWTPN  180
DQSSTLELSS EGRGEDLEST CYRFQSETGS SDIIQEVEFD ASAQREGKWM HPLADEALST  240
EPPFQNHRSS AHIPSKVDIA LECARLQQQR LLPPLMEDFP QFDLTDSRFL NPGREDMKET  300
DILQEILSVA CASQELMNQS SYQNTWTYNH PLLDEFTPLM ELDIQGRNEE AQHHLINDIG  360
SSRFVEISDL EEEFKGQRVV ENLRGIKMSH KDLDEITLEE HKTVLIESIS NFQREDPDNK  420
GGINEHGTFK GFSDNETKPN SSEFLSNDFT IAFRNDNPDG IFHENGDDND FASTPTFHVY  480
EKVEVSRGLY VSSCNSAKTF FHRVEPSKTV RVHMNTMVTH ERAVPKSEIL RKNQHRGSVF  540
SKFKLFARDK FMWIKTSVKP WKGSSMINET ITSNISIVAL LLTCCIYLGE EHEGVRSELP  600
SNDKALIDEK EDSYYEEVKE MKELKRMEGS AKKKIGLFTN IRGTSISNTF LNWKWTFLFL  660
TVSLALYAFV INKYLLQLKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-132	NAC family protein