PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWR90329.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 144aa MW: 16350.2 Da PI: 9.2239 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 81.6 | 5.3e-26 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien rqvtf+kRr+g+lKKA+ELSvLCda++ ++ifs++gklye + RWR90329.1 9 KRIENAVHRQVTFCKRRAGLLKKAKELSVLCDADIGIMIFSTHGKLYELA 58 79*********************************************965 PP | |||||||
2 | K-box | 25.2 | 7.1e-10 | 92 | 143 | 19 | 70 |
K-box 19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKn 70 +e+ Lk+eie Lq+ + + G +++l eL Le++Le + +iR+ K+ RWR90329.1 92 KESLMLKQEIELLQKGLSYMHGGRTATMTLDELDALERHLEIWMCHIRTAKY 143 78899*******************************************9996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence |
MARGKIQMKR IENAVHRQVT FCKRRAGLLK KAKELSVLCD ADIGIMIFST HGKLYELATK 60 GTMEGLIERY MKKSGAAETE VGEGNPPPEP RKESLMLKQE IELLQKGLSY MHGGRTATMT 120 LDELDALERH LEIWMCHIRT AKYC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71692.1 | 7e-56 | MIKC_MADS family protein |